Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2431 ATGGTTGGTGAGGCTGCAAAGAACATGGCTGCACATTACCCTGCTAACACTATCTTTGTTGAGGATGCAGTTGTCACAGTACCGGCTTATTTCAACAACTCTCAACGTCAAGCAACCAAAGATGCAGGAGCTATTACTGGCCTTAATGTCATGCAAATAATCAATGAGCCCACAGCTGCAGCAATTGCTTATGGTCTTGACAATAAAGGCAACTATGACAACGAGAGGAACATATTTGTGTTTGATCTTGGTGGTGGTACCTTTGATGTGTCTCTTGTCACAATTAATAAGGGTGACTTCAATGTTAAAGTAGTTGATGGTGACACACACCTTGGGGGAGAGGACTTTGACAACAGAATGGTGAAGTACTTTGTGGAAGAGTTTAAGAGGAAGCATAAGAAGGACATCATAGTGAGTCCAAAGGCCCTCAGAAAGCTAAGAACTTCTTGTGAGAAGGCAAAAAGAGCACTGTCATCCCCATCCATTGTTGAGACAATTGTTGAGGTTGATGCTTTGGGCATCAACCCAGATGAGGCTATTGCTTATGGTGCTGCTGTTCAAGCTGCCATATTAAGTGGTCATGGAAATGAAAATTTACAGGACATTGTCTTAAGAGATGTCACCCCATTGTCCTTGGGTTTCAAGAAACATGGTGGTATCATGCAAGTTGTAATTCCAAGGAACACTAGTATTCCAACAACGATGTTGGTTGATAATTTTACTACTTTCGAGGACAACCAAACAAATGTTCATTTTGATATTTATCAGGGTGAGAGAGCAATGGCAAAGGATAACTATTTGCTCGATCCGTTTTACTTAACAATTCCTCCAGAACCAAAGGGGGTCCCTAAGTTCAAAGTTTGCTTTTCCATTGATGAGAATGGTATATTAAAAGTGTCTGTTGAGGAAACTACAACAGGGAATGAGAATGGGATCACAATTACCAATAGAGAAGGAAGACTATCAAAAGAAGACATTGAAAGGATGGTTCAAGAAGCTGAGGAGTTCAAGGCTGATGATGAGAGGCACAAGAAGAAAGCTGAAGCAAAGAATGCTTTGGAGGACCATATATACAAAATCAGGACTGGTCTAAATAATGGGAAGATTGGCTCAGGGCTATCAACTACAGAAAAGAAGAGGATTGAGGATGCTATTGAAAGGGCCTCAAAGCTGGTTGATGATCAACAGCTCGCTGAAGTTGATGACTATGAGCATGAGATGAGCGAGCTCAAGACGGTGTCTTTAATCCCATAA 1254 0.4131 MVGEAAKNMAAHYPANTIFVEDAVVTVPAYFNNSQRQATKDAGAITGLNVMQIINEPTAAAIAYGLDNKGNYDNERNIFVFDLGGGTFDVSLVTINKGDFNVKVVDGDTHLGGEDFDNRMVKYFVEEFKRKHKKDIIVSPKALRKLRTSCEKAKRALSSPSIVETIVEVDALGINPDEAIAYGAAVQAAILSGHGNENLQDIVLRDVTPLSLGFKKHGGIMQVVIPRNTSIPTTMLVDNFTTFEDNQTNVHFDIYQGERAMAKDNYLLDPFYLTIPPEPKGVPKFKVCFSIDENGILKVSVEETTTGNENGITITNREGRLSKEDIERMVQEAEEFKADDERHKKKAEAKNALEDHIYKIRTGLNNGKIGSGLSTTEKKRIEDAIERASKLVDDQQLAEVDDYEHEMSELKTVSLIP 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2431 417 PANTHER HEAT SHOCK PROTEIN 70KDA 4 172 IPR013126 GO:0005524|GO:0140662
Mibi01g2431 417 ProSitePatterns Heat shock hsp70 proteins family signature 2. 80 93 IPR018181 -
Mibi01g2431 417 Gene3D - 350 415 IPR029048 -
Mibi01g2431 417 FunFam Molecular chaperone DnaK 113 186 - -
Mibi01g2431 417 SUPERFAMILY Actin-like ATPase domain 2 67 IPR043129 -
Mibi01g2431 417 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 348 413 IPR029048 -
Mibi01g2431 417 Coils Coil 378 398 - -
Mibi01g2431 417 SUPERFAMILY Actin-like ATPase domain 73 193 IPR043129 -
Mibi01g2431 417 FunFam Heat shock 70 kDa protein 195 350 - -
Mibi01g2431 417 Gene3D - 3 68 - -
Mibi01g2431 417 Pfam Hsp70 protein 9 162 IPR013126 GO:0005524|GO:0140662
Mibi01g2431 417 Pfam Hsp70 protein 172 414 IPR013126 GO:0005524|GO:0140662
Mibi01g2431 417 Gene3D - 69 111 - -
Mibi01g2431 417 Gene3D Actin; Chain A, domain 4 112 170 - -
Mibi01g2431 417 FunFam Endoplasmic reticulum chaperone BiP 1 80 - -
Mibi01g2431 417 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 196 349 IPR029047 -
Mibi01g2431 417 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 197 354 IPR029047 -
Mibi01g2431 417 Coils Coil 326 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2431 Mibi-ChrMibi01 39668401 39670368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2431 20 414 Calmodulin-binding Proteins AT5G02490 44.351 8.16e-115 348