Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2430 ATGGGTGGTAAATCACAGCAGAAACAAGCCATCGGTATTGATCTTGGAACCACATACTCATGCGTTGCAATATGGCAACATGGTCGAGCAGAGATCATCGTCAACGATCAAGGCAACAGAACGACGCCGTCTTATGTTGCTTTCACTGATACTCAAAGGATGGTCGGTGATTCTGCGATGAACCAAGCTGCTCTTAACCCTACTAATACTGTGTTTGATGCAAAGAGGTTAATTGGAAGGAGATTTAGTGATTCTCACGTTCAAAGTGATATAAATCTATGGCCATTTAAAATCATTGGTGGTGATGATGATAAGCCCAAATTTGTTGTAAATTTTAAGTGTGAGGAAAGACATTTTCTACCCGAAGAAATATCATCCATGATATTAGCAAAGATGCATGAGATTGCCGAGGCATATCTTGGTACAACAGTTAAAGATGTAGTTGTTACCGTGCCTGCTTATTTTAACGATTCTCAACGTCAAGCTACGAAAGATGCAGGCACAATTGCTGGCCTAAATGTCATACGAATAATCAATGAGCCCACTGCTGCAGCGATTGCATATGGTTTTGATAAGAAAGATAGGTTTGACGGAGAGAGGAACATTTTTGTGTTTGATCTTGGTGGTGGGACCTTTGACGTGTCTCTTGTCACAATTAACAAGGGTAACTTTAATGTTAAAGGAGTTGATGGCGACACACACCTTGGGGGAGAGGACTTTGACAACAGAATGGTGAATTACTTTGTGGAAGAGTTGAAGAGGAAGCATAACAAGGATATTAGTAGGAATGCAAAGGCCCTTAGGAGGTTGAGAACTGCGTGTGAGAGGGCAAAGAGAACGTTATCATCCACTTCAATGGTTGATACAACTATTGACATTGATGCTTTATATGAGGGCATTGACTTTTCTTCAAAAATCACTCGTGCTAAATTTGAGGAGTTGAACAATGACCTCTTCCAAAAGTGTTTGACAATTGCAGAGAGGTGTCTTGTAGATGCTAAGATGGACAGGAGAAATATACATGATGTTGTTCTTGTTGGTGGCTCCACAAGAATTCCTAAAGTTCAACAACTATTACAAGACTTCTTCCAAGGGAAGGATCTATGCAGAAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGCCATATTAAGTGGTCATGGAAATGAGAATTTGCAGGGTATTATCTTGAGAGAAGTCACCCCATTGTCCCTAGGATGTGAGAAATATGGTGGTATCATGCATGTAATAATTCCAAGGAACACTAGCATTCCTACAACGATGTGGGTTGATAATCTTACGACTGCGAAGGACAACCAAACAAAAGTCTCTTTTGATATTTATCAGGGTGAGAGAGCTATGGCAAAGGATAACTATTTGTTGAATTCATTTTATGTAACCATTTCCCCGGAACCAAAGGGCGTTCCTAAGTTCAAAGTTTGCTTTTCCATTGATGAGAATGGCATCTTAAAAGTCTCTGCCAAGGAAATCAGAAAAGGGAATCAAAATGTGGTAACAATAACCAATGGAAAAAGAAGACAATCGAAAGAAAAGATTGAAAGGATGATTCAAGAAGCTGAGAAATACAAGGCTGATGATGAATTGAACAAGAAGAAAGCTAAAGCAAAGAGTGCTTTGAATGACTATATACACAAAATCAGGAATAGTTTAAATAATGGGATAATTCTTGGCTCAGGGCCTTACAAGAAGAAGATTATGAATGCGATTGAAACAGCGTCAAAGTTGGTTGATAACAAACAACTTGCTGAAGTTGATGAGTATGAGCATGAGATGAGAGAGCTTCAGAGATGGAACACAAGCGAAGGTTTTCAAAAATGCAGTTTCTCGTGTTTCTTGTGA 1875 0.3963 MGGKSQQKQAIGIDLGTTYSCVAIWQHGRAEIIVNDQGNRTTPSYVAFTDTQRMVGDSAMNQAALNPTNTVFDAKRLIGRRFSDSHVQSDINLWPFKIIGGDDDKPKFVVNFKCEERHFLPEEISSMILAKMHEIAEAYLGTTVKDVVVTVPAYFNDSQRQATKDAGTIAGLNVIRIINEPTAAAIAYGFDKKDRFDGERNIFVFDLGGGTFDVSLVTINKGNFNVKGVDGDTHLGGEDFDNRMVNYFVEELKRKHNKDISRNAKALRRLRTACERAKRTLSSTSMVDTTIDIDALYEGIDFSSKITRAKFEELNNDLFQKCLTIAERCLVDAKMDRRNIHDVVLVGGSTRIPKVQQLLQDFFQGKDLCRSINPDEAVAYGAAVQAAILSGHGNENLQGIILREVTPLSLGCEKYGGIMHVIIPRNTSIPTTMWVDNLTTAKDNQTKVSFDIYQGERAMAKDNYLLNSFYVTISPEPKGVPKFKVCFSIDENGILKVSAKEIRKGNQNVVTITNGKRRQSKEKIERMIQEAEKYKADDELNKKKAKAKSALNDYIHKIRNSLNNGIILGSGPYKKKIMNAIETASKLVDNKQLAEVDEYEHEMRELQRWNTSEGFQKCSFSCFL 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2430 624 SUPERFAMILY Actin-like ATPase domain 197 391 IPR043129 -
Mibi01g2430 624 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Mibi01g2430 624 Gene3D Actin; Chain A, domain 4 236 321 - -
Mibi01g2430 624 PANTHER HEAT SHOCK PROTEIN 70KDA 10 579 IPR013126 GO:0005524|GO:0140662
Mibi01g2430 624 FunFam Heat shock 70 kDa 236 321 - -
Mibi01g2430 624 PRINTS 70kDa heat shock protein signature 399 418 - -
Mibi01g2430 624 PRINTS 70kDa heat shock protein signature 480 496 - -
Mibi01g2430 624 PRINTS 70kDa heat shock protein signature 372 392 - -
Mibi01g2430 624 PRINTS 70kDa heat shock protein signature 9 22 - -
Mibi01g2430 624 PRINTS 70kDa heat shock protein signature 340 356 - -
Mibi01g2430 624 PRINTS 70kDa heat shock protein signature 37 49 - -
Mibi01g2430 624 PRINTS 70kDa heat shock protein signature 147 167 - -
Mibi01g2430 624 PRINTS 70kDa heat shock protein signature 59 67 - -
Mibi01g2430 624 PRINTS 70kDa heat shock protein signature 210 220 - -
Mibi01g2430 624 Gene3D - 72 127 - -
Mibi01g2430 624 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Mibi01g2430 624 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 396 550 IPR029047 -
Mibi01g2430 624 Coils Coil 517 548 - -
Mibi01g2430 624 FunFam Heat shock 70 kDa protein 393 548 - -
Mibi01g2430 624 Pfam Hsp70 protein 10 609 IPR013126 GO:0005524|GO:0140662
Mibi01g2430 624 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 394 547 IPR029047 -
Mibi01g2430 624 Gene3D - 193 369 - -
Mibi01g2430 624 FunFam heat shock 70 kDa protein-like 72 127 - -
Mibi01g2430 624 FunFam Heat shock protein 70 11 200 - -
Mibi01g2430 624 ProSitePatterns Heat shock hsp70 proteins family signature 3. 343 357 IPR018181 -
Mibi01g2430 624 Gene3D - 548 611 IPR029048 -
Mibi01g2430 624 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 547 609 IPR029048 -
Mibi01g2430 624 Gene3D - 11 387 - -
Mibi01g2430 624 SUPERFAMILY Actin-like ATPase domain 9 192 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2430 Mibi-ChrMibi01 39646658 39648726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2430 1 607 Calmodulin-binding Proteins AT3G12580 65.574 0.0 812