Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2428 ATGGGTTGGGCACAGCAAAAACTAGCTGTTGGGATTGATCTTGGAACCACATACTCGTGTGTTGCAGTTTGGCAACATGGTCGAGCAGAGATAATTGTCAACGATCAAGGGAATAGAACGACGCCATCGTATGTTGCCTTCACTGATACTCAAAGAATGGTCGGTGATGCTGCCAAGAACCTGGCTGCACATAACCCTACAAACACTGTCTTTGATGCGAAGAGATTAATTGGTCGGAGATTCGATGATTTCTATGTCCAGATTGAGAATGCAGTTGTCACTGTGCCTGCTTATTTCAGTGACTCTCAACGTCAAGCAACCAAAGACGCAGGCACTATTGCTGGCCTTAATGTAATGCGAATAATCAATGAGCCCACTGCTGCAGCAATTGCATATGGTCTTGACCAAAAAGACAATTGTGACAAGGAGAGGAACATTTTTGTGTTTGATCTTGGAGGTGGCACCTTCGACGTTTCTCTTGTGACAATTAATAAGGGTGACTTTAAAGTTAAAGCAGTTGATGGTGACACACATCTTGGAGGAGAGGACTTTGACAACAGAATGGTCAGCTATTTTGTGGATGAGTTTAAGAGAAAGCGTAAGAAGGACATTAGTGGGAGTCCAAAAGCCCTTAGGAGATTGAGAACTGCCTGTGAGAGGGCAAAAAGGGCACTCTCATCCACATCCATTGTTGATACAATAGTTGAGGTTGATGCTTTCTACGAGGGCATTGACTTTTGTTCGACGATCACTCGTGCAAGATTTGAGGAAATGAACAAAGACCTTTTCCAAAAGTGTCTGGACATTACAGGAAAGTGTCTCATGGAGGCTAAGATGGATAAGAGCAGTATTCATGAGGTTGTCCTTGTTGGCGGGTCTACAAGAATTCCAAAAGTTCAACAACTATTACAAGACTTCTTCAAAGGGAAGGATTTATGCAGGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCCGCTGTTCAAGCTGCCATATTAAGTGGGCAAAAATATGAAATGTTACAGGACATTGTCTTGAGAGATGTCACACCATTGTCCTTAGGTTTCGAACTACATAGTGGTCTCAAGAAGGTAGGTATTCCGAAGAACACTTGCATTCCTACAAAAATGTGGGTCGATCATTTGACCACAGTGAAGGATAACCAAACAAGAGTCTCTGTTAATGTTTATCAGGGTGAGAGAGCAATGGCAAAGGATAATAATTTGCTGGATACATTTTACCTAACCATTGCCCCAGAACCAAGGGGTGTCCCTAAGTTCAAAGGTTGTTTTTCCATTGATGACAATGGTATCTTAAAAGTCTCTGTTAAAGAAACTAGAACAGGAAACGAGAATGGGATAACAATCAATAGAGAAGGAAGACTATCAAAAGACGATATTGAAAGGATGGTTCAAGAAGCTGAGAAATATAAGGCTGATGACGAGATGTACAAGAAGAAAGCTAAAGCAAAGAATGCTTTGGAGGACTATATTTACAAAATCAGGTCTGGTATAAATAATGGGACGATTGGCTTAGGGCTTTCAGATAAAAAGAAGATTGAGGATGTAATTGAAACAGCCTCAAAGCTGGTTGATGACCCACAACTTGCGGAAGTTGAAGAGTATGAGCATGAGATGAGTAAGCTCAGAGGTTATCTTTAG 1662 0.417 MGWAQQKLAVGIDLGTTYSCVAVWQHGRAEIIVNDQGNRTTPSYVAFTDTQRMVGDAAKNLAAHNPTNTVFDAKRLIGRRFDDFYVQIENAVVTVPAYFSDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDQKDNCDKERNIFVFDLGGGTFDVSLVTINKGDFKVKAVDGDTHLGGEDFDNRMVSYFVDEFKRKRKKDISGSPKALRRLRTACERAKRALSSTSIVDTIVEVDAFYEGIDFCSTITRARFEEMNKDLFQKCLDITGKCLMEAKMDKSSIHEVVLVGGSTRIPKVQQLLQDFFKGKDLCRSINPDEAVAYGAAVQAAILSGQKYEMLQDIVLRDVTPLSLGFELHSGLKKVGIPKNTCIPTKMWVDHLTTVKDNQTRVSVNVYQGERAMAKDNNLLDTFYLTIAPEPRGVPKFKGCFSIDDNGILKVSVKETRTGNENGITINREGRLSKDDIERMVQEAEKYKADDEMYKKKAKAKNALEDYIYKIRSGINNGTIGLGLSDKKKIEDVIETASKLVDDPQLAEVEEYEHEMSKLRGYL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2428 553 FunFam Heat shock 70 kDa protein 1A 3 150 - -
Mibi01g2428 553 Gene3D - 491 553 IPR029048 -
Mibi01g2428 553 ProSitePatterns Heat shock hsp70 proteins family signature 2. 148 161 IPR018181 -
Mibi01g2428 553 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 342 495 IPR029047 -
Mibi01g2428 553 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 490 551 IPR029048 -
Mibi01g2428 553 Pfam Hsp70 protein 87 550 IPR013126 GO:0005524|GO:0140662
Mibi01g2428 553 Gene3D - 88 331 - -
Mibi01g2428 553 PRINTS 70kDa heat shock protein signature 424 440 - -
Mibi01g2428 553 PRINTS 70kDa heat shock protein signature 343 362 - -
Mibi01g2428 553 PRINTS 70kDa heat shock protein signature 36 48 - -
Mibi01g2428 553 PRINTS 70kDa heat shock protein signature 8 21 - -
Mibi01g2428 553 PRINTS 70kDa heat shock protein signature 316 336 - -
Mibi01g2428 553 PRINTS 70kDa heat shock protein signature 58 66 - -
Mibi01g2428 553 PRINTS 70kDa heat shock protein signature 284 300 - -
Mibi01g2428 553 PANTHER HEAT SHOCK PROTEIN 70KDA 9 87 IPR013126 GO:0005524|GO:0140662
Mibi01g2428 553 SUPERFAMILY Actin-like ATPase domain 8 136 IPR043129 -
Mibi01g2428 553 SUPERFAMILY Actin-like ATPase domain 141 335 IPR043129 -
Mibi01g2428 553 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Mibi01g2428 553 Gene3D - 3 87 - -
Mibi01g2428 553 FunFam Heat shock 70 kDa 180 265 - -
Mibi01g2428 553 Gene3D - 137 313 - -
Mibi01g2428 553 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 338 490 IPR029047 -
Mibi01g2428 553 Gene3D Actin; Chain A, domain 4 181 265 - -
Mibi01g2428 553 ProSitePatterns Heat shock hsp70 proteins family signature 3. 287 301 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2428 Mibi-ChrMibi01 39539615 39541743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2428 9 549 Calmodulin-binding Proteins AT1G56410 61.037 0.0 699