Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2427 ATGGGTGACAGGGCGCAGCAAAAACTAGCTGTTGGGATTGATCTTGGAACCACATACTCGTGTGTTGCAGTTTGGCAACATGGTCGAGCAGAGATAATTGTCAACGATCAAGGGAATAGAACGACGCCATCGTATGTTGCCTTCACTGATACTCAAAGAATGGTCGGTGATGCTGCCAAGAACCTGGCTGCACATAACCCTATAAACACTGTCTTTGGTGTGAAGAGATTAATTGGTCGGAGGTTTGCTGATCCTGATGTCCAGAGTGATATTAAACTTTGGCCGTTTAAGATCATTCGTGATAAAAATGATAAGCCCAACATTGTTGTAAATTTTAAATCACAGGAAAAACAATTTCTACCAGAACAAATATCAGCTATGGTATTAGAAAAGATGCGTGAGATTGCACAGACATATCTTGGTACGACAGTTAAGGATGCAGTTGTCACTGTGCCTGCTTATTTCAATGACTCTCAACGTCAAGCAACCAAAATTGCAGGCACTATTGCTGGCCTTAATGTAATGCAAATAATCAATGAGCCCACTGCTGCAGCAATTGCATATGGTCTTGACAAGAAAGACAATTGTGAGGAGGAGAGGAACATATTTGTATTTGATCTTGGTGGTGGCACCTTCGACGTTTCTCTTGTGACAATTAATAAGAGTGACTTTAAAGTTAAAGCAGTTGATGGTGACCCACATCTTGGAGGAGAGGACTTTGACAGCAGAATGGTCAGCTATTTTGTGGAAGAGTTGAAAAGGAAGCATCGGAAGGACATTAGTGGGAGTCCAAGGGCCCTTAGGAGGTTGAGAACTGCCTGTGAGAAGGCAAAAATAGCACTCTCATCCCCATCCAATTTTCATGCGACAGTTTATGTTGATGGTTTATACGATGGGACTGACTTTAAAACAACTATCACCCGTGCGAAGTTTGAGGAAATGAACAAAGACCTCTTCCAAAAGTGTTTGACAATTGCTGAGAGGTGTCTTGTAGATGCTAAGATGGACAAGAGCAGTATTCATGATGTTGTCCTTGTTGGTGGGTCCACAAGAATCCCTAAAGTTCAACAACTATTACAAGACTTCTTCGAAAGGAAGGATCTATGCAGGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGCCATATTAAGTGGTCAAAGAGATGACATTGTCTTGAGAGATGTCACCCCATTGTCCTTAGGTTTCGAACTAGACGATGGTCGCATGAAAGTAGTAATTCCAAGGAACACTAGCATTCCTAAAACGTATTCGGTTGATAAATATACTACTGTGAGGGACAACCAAACGGGAATGTCTATTTGTGTTTATCAGGGTGAGGGAGCAGTGGCAAGGGAAAATACTTTGCTGGAAACGTTTTGCCTACCTATTCACCCAGAACCAGAAGGTGTTCCTAAGGTCAAAATTTGCTTTACCATTGATGACAATGGTATCTTACAAGTCTCTGCTAAGGAAACTAGAACAGGAATCGAAAATTCGATAGCAATAACCGATAGAGAAGGAAGGCTATCAAAAGACGATATTGAAAGGATGGTTCAAGAAGCTGAGAAATATAAGGCTGATGATGAGATGTACAAGGAGAAAGCTAAAGCAAAAAATGCTTTGCAGGAGTGTATAAACAAAATCAGGTCTGGTATAAGGCTGGAGATTGACGATGTGATTGAAACAGCCTCAGAGCTGGCTGATGACCCACAACTTGCAGAAGTTGAAGAGTATGAGCATGAGATGAAAAAGCTCGAGAGGTATCTTTAG 1788 0.4183 MGDRAQQKLAVGIDLGTTYSCVAVWQHGRAEIIVNDQGNRTTPSYVAFTDTQRMVGDAAKNLAAHNPINTVFGVKRLIGRRFADPDVQSDIKLWPFKIIRDKNDKPNIVVNFKSQEKQFLPEQISAMVLEKMREIAQTYLGTTVKDAVVTVPAYFNDSQRQATKIAGTIAGLNVMQIINEPTAAAIAYGLDKKDNCEEERNIFVFDLGGGTFDVSLVTINKSDFKVKAVDGDPHLGGEDFDSRMVSYFVEELKRKHRKDISGSPRALRRLRTACEKAKIALSSPSNFHATVYVDGLYDGTDFKTTITRAKFEEMNKDLFQKCLTIAERCLVDAKMDKSSIHDVVLVGGSTRIPKVQQLLQDFFERKDLCRSINPDEAVAYGAAVQAAILSGQRDDIVLRDVTPLSLGFELDDGRMKVVIPRNTSIPKTYSVDKYTTVRDNQTGMSICVYQGEGAVARENTLLETFCLPIHPEPEGVPKVKICFTIDDNGILQVSAKETRTGIENSIAITDREGRLSKDDIERMVQEAEKYKADDEMYKEKAKAKNALQECINKIRSGIRLEIDDVIETASELADDPQLAEVEEYEHEMKKLERYL 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2427 595 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Mibi01g2427 595 FunFam Heat shock protein 9 72 127 - -
Mibi01g2427 595 Coils Coil 520 540 - -
Mibi01g2427 595 FunFam Heat shock 70 kDa 236 321 - -
Mibi01g2427 595 FunFam Heat shock protein 70 11 203 - -
Mibi01g2427 595 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
Mibi01g2427 595 PANTHER HEAT SHOCK PROTEIN 70KDA 10 571 IPR013126 GO:0005524|GO:0140662
Mibi01g2427 595 PRINTS 70kDa heat shock protein signature 9 22 - -
Mibi01g2427 595 PRINTS 70kDa heat shock protein signature 210 220 - -
Mibi01g2427 595 PRINTS 70kDa heat shock protein signature 476 492 - -
Mibi01g2427 595 PRINTS 70kDa heat shock protein signature 37 49 - -
Mibi01g2427 595 PRINTS 70kDa heat shock protein signature 340 356 - -
Mibi01g2427 595 PRINTS 70kDa heat shock protein signature 59 67 - -
Mibi01g2427 595 PRINTS 70kDa heat shock protein signature 395 414 - -
Mibi01g2427 595 PRINTS 70kDa heat shock protein signature 147 167 - -
Mibi01g2427 595 PRINTS 70kDa heat shock protein signature 372 392 - -
Mibi01g2427 595 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 384 568 IPR029047 -
Mibi01g2427 595 SUPERFAMILY Actin-like ATPase domain 199 389 IPR043129 -
Mibi01g2427 595 SUPERFAMILY Actin-like ATPase domain 9 192 IPR043129 -
Mibi01g2427 595 Gene3D - 72 127 - -
Mibi01g2427 595 Gene3D - 193 369 - -
Mibi01g2427 595 Gene3D - 11 383 - -
Mibi01g2427 595 Pfam Hsp70 protein 10 588 IPR013126 GO:0005524|GO:0140662
Mibi01g2427 595 ProSitePatterns Heat shock hsp70 proteins family signature 3. 343 357 IPR018181 -
Mibi01g2427 595 FunFam Heat shock 70 kDa protein 390 544 - -
Mibi01g2427 595 Gene3D Actin; Chain A, domain 4 236 321 - -
Mibi01g2427 595 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 547 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2427 Mibi-ChrMibi01 39449110 39451185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2427 10 592 Calmodulin-binding Proteins AT3G12580 63.394 0.0 758