Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2402 ATGTCTTCGTCTGCTTGTTCATGGAGTGAAAAGGAAAACAAAGCCTTTGAAATGGCTCTGGCCGTTTATGATAAGGAAACACCAGACCGTTGGTACAACGTTGCTCAAGCTGTTGGCGGCAATAAAACCGTAGAACAAGTGAAGAAGCACTATGAACTCCTTCAAGAAGACCTCAAGCGTATTGAGTCTGGCCAAGTGCCTGATCCTCCATACAAGTAG 219 0.4521 MSSSACSWSEKENKAFEMALAVYDKETPDRWYNVAQAVGGNKTVEQVKKHYELLQEDLKRIESGQVPDPPYK 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2402 72 FunFam Transcription factor SRM1 1 68 - -
Mibi01g2402 72 Pfam Myb-like DNA-binding domain 7 51 IPR001005 -
Mibi01g2402 72 CDD SANT 7 54 IPR001005 -
Mibi01g2402 72 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 72 IPR044636 GO:0003700
Mibi01g2402 72 Coils Coil 44 64 - -
Mibi01g2402 72 Gene3D - 1 67 - -
Mibi01g2402 72 SUPERFAMILY Homeodomain-like 7 63 IPR009057 -
Mibi01g2402 72 SMART sant 4 57 IPR001005 -
Mibi01g2402 72 ProSiteProfiles SANT domain profile. 3 59 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2402 Mibi-ChrMibi01 38918618 38918836 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi01g2402 Myb_DNA-binding 1.7e-05 CL0123