Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2392 ATGAGAAGAAACGTGGAAGATAATGCTTTGCTTCCTAACTGGAGCACTGTAATTCATAATCAGCTATCAAACGGTCAACATTTATGCACAAAAAAGAAAAATTCCAACAGAAAAGCCATTATAGCAGGCAGTAGTGCAGCTGCTGGAGCAGCAGTTTTTTTAATTCTTGGATTATGCCTCTTCATTATGCGAAGACGAAGGCAAAGAATTGCGGAACAGTCACAGACCAAGGACCTCTTCATGGCTGCTCCTTATAGCAGAGGCGTTACTTCCTCTACAACAACTTCATCTCAAAGTGTCCCATCTTACGTTACCTCAAAGTCTGAATCTATACAACATAGTTTCTTCTATGGTGTCAAAGTGTTTAGCTATACTGAACTAGAGGAAGCCACTAAAAATTTTGATCCATCCATGGAACTTGGTGATGGAGGTTTCGGCACTGTTTATTATGGCATTCTGAAAGATGGGCGTGCAGTTGCAGTGAAAAGACTTTACGAAAGCAATCTGAAACGTGTCGAGCAATTCAGGAATGAAGTTGAGATTCTAGCTAGACTAAAGCATAAAAACCTGGTTGAACTTTATGGATGTACCTCTAGACATAGCCGAGAACTTCTCCTTGTCTATGAATACATTGCTAATGGAACAGTATCAGACCATCTCCATGGGAATCGATCCAAATCTTCCTTGCTCCCTTGGCGCACACGATTGAAAATCGCTGTAGAATCGGCCGAGGCCCTAGCCTTCCTCCACGAGTCTGATGTCATACACCGTGATGTTAAAACCAATAACATTCTCCTAGACCATAATTTTTGTGTTAAGGTTGCTGATTTTGGTCTTTCAAGATTGTTTCCAAATGATGTTACCCATGTGTCAACTGCCCCACAAGGAACACCTGGTTATGTTGATCCTGAGTATTATCAGTGCTACCAAGTCACTAGTAAAAGCGATGTTTATAGCTTTGGAGTTGTCTTAGTTGAGCTCATATCATCCTTAGAAGCGGTGGACATCACCAGGCACCGACATGATATAAACTTAGCGAATCTTGCTATCAACAGAATTCAGAATCATCAAGTTCATGAGTTAATTGATCCCCTTCTAGGTTTCGAAAAAGACAATGCAGTGAAGCAGATGACAACAGCAGTGGCAGAATTGGCCTTTAGGTGTTTGCAGCAAGATGGCGACATGAGACCCTCCATGAATGAGGTTCTTCAAGTCTTAAGAGGGATCCAAAAAGAAGGGTATGGTGGACCTAATGAAGATGTAGGGAAGAAGAAGAATAACAACAGGGTGGATGAAATCATGCTTTTGAAAGATTCTCCTCCTCCTTTTTCGCCAGATTCAGCTGCTGATAACTGTGTTAGTTCCTCTACTACTTCTACTTCCTTATAA 1389 0.414 MRRNVEDNALLPNWSTVIHNQLSNGQHLCTKKKNSNRKAIIAGSSAAAGAAVFLILGLCLFIMRRRRQRIAEQSQTKDLFMAAPYSRGVTSSTTTSSQSVPSYVTSKSESIQHSFFYGVKVFSYTELEEATKNFDPSMELGDGGFGTVYYGILKDGRAVAVKRLYESNLKRVEQFRNEVEILARLKHKNLVELYGCTSRHSRELLLVYEYIANGTVSDHLHGNRSKSSLLPWRTRLKIAVESAEALAFLHESDVIHRDVKTNNILLDHNFCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYYQCYQVTSKSDVYSFGVVLVELISSLEAVDITRHRHDINLANLAINRIQNHQVHELIDPLLGFEKDNAVKQMTTAVAELAFRCLQQDGDMRPSMNEVLQVLRGIQKEGYGGPNEDVGKKKNNNRVDEIMLLKDSPPPFSPDSAADNCVSSSTTSTSL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2392 462 Gene3D Transferase(Phosphotransferase) domain 1 211 414 - -
Mibi01g2392 462 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 24 457 IPR044652 GO:0004672
Mibi01g2392 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Mibi01g2392 462 ProSitePatterns Protein kinases ATP-binding region signature. 140 162 IPR017441 GO:0005524
Mibi01g2392 462 SUPERFAMILY Protein kinase-like (PK-like) 108 409 IPR011009 -
Mibi01g2392 462 Gene3D Phosphorylase Kinase; domain 1 104 210 - -
Mibi01g2392 462 CDD STKc_IRAK 140 409 - -
Mibi01g2392 462 FunFam Wall-associated receptor kinase-like 20 211 418 - -
Mibi01g2392 462 Pfam Protein tyrosine and serine/threonine kinase 139 405 IPR001245 GO:0004672|GO:0006468
Mibi01g2392 462 MobiDBLite consensus disorder prediction 417 432 - -
Mibi01g2392 462 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 106 210 - -
Mibi01g2392 462 MobiDBLite consensus disorder prediction 414 462 - -
Mibi01g2392 462 ProSiteProfiles Protein kinase domain profile. 134 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2392 462 MobiDBLite consensus disorder prediction 448 462 - -
Mibi01g2392 462 SMART serkin_6 134 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2392 Mibi-ChrMibi01 38584544 38586751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2392 106 458 Receptor kinase-like Gene Family AT1G25390 62.117 2.34e-150 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi01g2392 PK_Tyr_Ser-Thr 4.9e-50 CL0016