Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2360 ATGTCCCCACACAATGTGGTGGTTCTAGACAATGGTGGAGGCCTAATTAAAGCTGGCCATGGCGGAGAGTTTGACCCCTCTGTTGTTGTTCCCAACTGCCTTTACCGGCCTCCATCCTCCAAAAAATGGCTCCACCTAAACCCCCTCAACCCCAGCACCACCACCACGGAACCATCCTCAGTCAGCGAAGTGGACCTCACCTCTGCTTCTGTTCGACGGCCCATTGATAGAGGCTACATGATAAACCCTGAACTTCAAAGAGAAATATGGGCTCACCTCTTCTCCTCCATCCTCCACATAAACCCATCACACTCTTCCCTCCTCCTCACTGAACCCCTCTTCACCCTTCCTTCCATTCAGCGATCAATGGATGAGCTTGTCTTTGAGGATTTCAACTTCAAGTCTCTTTACGTGGCTGACTCGCCCTCGTTGGTTCATCTCTATGAGGCTAGTCGTAGGCCTGATGGTCTTGTCTCTAAAGCCCAATGCAGCCTTGTTGTGGATTGTGGGTTTTCATTCACACACGCCTCCCCTGTGTTTCAGAACTTCACTTTGAATTATGCTGTGAAGAGAATCGATTTGGGTGGCAAGGCATTGACCAATTATCTGAAGGAGTTGGTTTCTTTTAGGGCTGTTAATGTCATGGAGGAAACTTTTATTATGGATGATGTTAAGGAGAATCTCTGCTTTGTTTCTCTTGATATTCCCCGGGACCTCCAGATTGCAAGGAAACCTGGAAAAGAAAATCTCTTTAGATGCACATATGTCCTTCCGGATGGTGTTACACACACAAAAGGCTTTGTTAAATATCCAGATCAAGTACACAGATATCGTACTCTGGCTGATGATGCTCCTCTGGCTCCAACAGAAACAAAGGAGGGTATGGATAATCCAGAAATGACTGAGAAGCCTGAGGACAGAAGGAGAGTTGATTTGACAAAAAATGAGTTTGACTTGACAAATGAACGCTTTCTTGTCCCAGAGATGATCTTCCATCCTGCTGATTTAGGAATGAATGAGGCTGGACTAGCAGAATGCATTGTGCGAGCTGTTAATTGTTGCCATCCACAACTCCACCCTGTACTATATGAGAGCATCATTTTAACAGGTGGAAGCACCTTATTTCCTCAATTTGCTGAGAGATTAGAGATGGAGCTGCGGCCTTTAGTTCCTGATGACTACCATGTGAAGATAACTTCTCAACAAGATCCCATATTAGGTGTTTGGCGTGGAGGATCATTGTTGGCATCTAGTCCAAATTTTGAAGCTATGTGTGTGACCAAGTCTGAGTACGAGGAGCTTGGATCCGCTAGATGTCGGAAGAGATTCTTTCATTGA 1338 0.4567 MSPHNVVVLDNGGGLIKAGHGGEFDPSVVVPNCLYRPPSSKKWLHLNPLNPSTTTTEPSSVSEVDLTSASVRRPIDRGYMINPELQREIWAHLFSSILHINPSHSSLLLTEPLFTLPSIQRSMDELVFEDFNFKSLYVADSPSLVHLYEASRRPDGLVSKAQCSLVVDCGFSFTHASPVFQNFTLNYAVKRIDLGGKALTNYLKELVSFRAVNVMEETFIMDDVKENLCFVSLDIPRDLQIARKPGKENLFRCTYVLPDGVTHTKGFVKYPDQVHRYRTLADDAPLAPTETKEGMDNPEMTEKPEDRRRVDLTKNEFDLTNERFLVPEMIFHPADLGMNEAGLAECIVRAVNCCHPQLHPVLYESIILTGGSTLFPQFAERLEMELRPLVPDDYHVKITSQQDPILGVWRGGSLLASSPNFEAMCVTKSEYEELGSARCRKRFFH 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2360 445 MobiDBLite consensus disorder prediction 46 66 - -
Mibi01g2360 445 PANTHER ACTIN 7 436 IPR004000 -
Mibi01g2360 445 FunFam Putative actin-related protein 5 408 436 - -
Mibi01g2360 445 Gene3D Actin; Chain A, domain 4 200 342 - -
Mibi01g2360 445 Gene3D - 139 410 - -
Mibi01g2360 445 FunFam Actin-related protein 6 139 199 - -
Mibi01g2360 445 FunFam ARP5 actin-related protein 5 homolog 341 407 - -
Mibi01g2360 445 Gene3D Actin; Chain A, domain 2 34 74 - -
Mibi01g2360 445 SUPERFAMILY Actin-like ATPase domain 162 444 IPR043129 -
Mibi01g2360 445 SMART actin_3 4 444 IPR004000 -
Mibi01g2360 445 CDD NBD_sugar-kinase_HSP70_actin 88 206 - -
Mibi01g2360 445 SUPERFAMILY Actin-like ATPase domain 2 145 IPR043129 -
Mibi01g2360 445 Pfam Actin 4 444 IPR004000 -
Mibi01g2360 445 Gene3D - 7 436 - -
Mibi01g2360 445 MobiDBLite consensus disorder prediction 285 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2360 Mibi-ChrMibi01 37815434 37817867 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2360 7 444 Cytoskeleton Gene Families AT3G18780 26.818 8.88e-53 179