Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2329 ATGCCTCCTTCAGGTCATAATCAATATGTCAATAATCAAGCTGGCCATTCCATTTCCACTGATGATTATTGTAGTTTGGAATATTCAAACAACATGACAATGCATTCCACAGTTAGAGATACTGGCTACTTGGAAGACATGCTTCAACCTACTAAAAGATTGAAAAAAGAACAGACTCTCAAGAAAGAAGTTACTGAGCCAAAATCAAGTTTAGAGAATGGAGAAAAGTCTGTAACACCAATGTCAAGTGTTGTTTCACTAGTTATGAATTTCTCATATGATCGAATAAAGGAACACATTAAGAGTCTAAGGCAGGGTTTTGGTCAGAGTACACTTGACGAAGGAGTAGGAGATGATGAAAAATCGTGCACATTGTGTAGAATGGAGAATATTTTCTATGAACCAGTGGTGATCTATTGCGTATCTTGTCAAATCCGCATCAAAAGAAGCGCGAATTTTTACTACAAAAGAGGAGAAGAATTTGATATAGAAAAGTTCCTTTGCACCTTCTGCTTCAAAAATTCTAAAGGTGAATCTATCAAAATCAACGGAGCATCTGTTCTCAAGGAAACACTTGACCACAAGAAAAACAATTATCTCGATGAAGAACCGTGGGCCCAATGTGATAAATGTCAAAAGTGGCAACACCAGATATGTTCACTCTTCAACGATAAGAAAAATTCAGAAGGCAACTTTCACTATGTGTGTCCCAAGTGCTGCTTAAAGGAAATTGAAGAAGGTATTCGTACACCCTTGGGGACTAAGGTTTTTGGTGCTAAGGACTTGCCAAGGACCAAGCTTAGTGACCATTTAGAGCAAAGACTCTTTTCACGTCTTGAACATGAGAGAGCACACAAGGCAAAAGATGAAGGAAAGAATATTGATGAGATTTCTGGAGCAGAAAATCTTACTATAAGGGTGGTACTATCAGTTCAAAAGCAATTGGAAGTTAAAAAGGAGTTTCTTGACATCTTTCCTGGGGAGAATTATCCTCTTGAATTCCCATATACGTCAAAAGAGTTTGGCTCAGAATGTGATCACCCAAATCATCGTTGTGTGTACATCTCATATCTTGATTCAGTCAAACATTTTAGGCCTCAAAGAGAGACTGTGACTGGAGAAGCTCTTCGTACATTTGTGTATCATAATATGTTGGAAAAGGCTTCCGAAGAAGACATTGTAGTTGGTCTGACAAATATCTATGATCAGTTCTTTGTTGCTTCTGAAAGATTCAACTCCAATGTGACAGCTGCTCATTTGCCATACTTTGACGGAGACTACTGGTCTGGTGCTGCTATGGCTGAAATCAAGAAAATTGAACAAGAGACTAAAGGAAAGTGTGACCAAATATTGGGATCAGGATTGAGCAAAAGAGCTTTACAGACAATGGGACATACAGACACTTCAAAAGACATCAGTAAAGACACTCTGGTGATGCATAAATTGGGCAACACTATATCACCTTTCAAAGAAGACTTCATCATAGTCCAGATGCAGCATGAATGCACACTTTGTCATGAGGTGATATTGTCTGGAAAGCGATGGTTTTGCACCAAGTGCAAGAAATACCAGCAGTGTGAAAGATGCCGTACTTCTGATACACATACTTCAACTAGTGGGGAAAAGCATACTCTCTACCAAGCGGTCGTGGGTGACATCCCCAGTGATACAAAGGAGAATGACATTGCAATAGACAATGATTTCTTTAAGAATAGGGTTGACTTTTTGAATTTCTGCCGACAGAATCACCTTCAGTTTGACACACTACGCCATGCTAAGCATTCTACGATGATGATTATCTATCATCTGATGAAATCCAATTTTCAATATGTTGATTCAACATGCAGCATTTGTTGTAAATATAATGTGTCCCAGTTGAACTGGAAGTGTGATATTTGTCCAAAGTTGGCCATTTGCTCACCATGCTATGAGGAAAAAGGCACTAATTGCCATGAGCATAAGTTGAGACAATGCACTTCCATAGCTAATTATCTGTCACAGAAAATAGGGTCAGAGCAGAAAACTGCACAAATACGAAAACTTCTGAAAATTCTAAAGCACGCATCTCAATGTGGCTCAACTAGAAGTCAACCATGCTCTTATAAGCACTGTTCTGGCATGAAGAAGTTGTTTTCCCATGCGAAAACGTGTAAGGTTAGAGTATGTGGGGGTTGCCAACATTGTACGAAAGCTTGGACATTGTTGGGACATCACTCGATGGAATGCAATGACTCGGAGTGTCGCGTCCCTCGATGCAAGGATTTGAAGAATCATATGGAATGGTTAGCACGGCGACAAGAATCTAGGCGTCGAGATGCAATCTTAGAATCAGCAAGAGAGGTCTCTGATCATGGTTAA 2358 0.3948 MPPSGHNQYVNNQAGHSISTDDYCSLEYSNNMTMHSTVRDTGYLEDMLQPTKRLKKEQTLKKEVTEPKSSLENGEKSVTPMSSVVSLVMNFSYDRIKEHIKSLRQGFGQSTLDEGVGDDEKSCTLCRMENIFYEPVVIYCVSCQIRIKRSANFYYKRGEEFDIEKFLCTFCFKNSKGESIKINGASVLKETLDHKKNNYLDEEPWAQCDKCQKWQHQICSLFNDKKNSEGNFHYVCPKCCLKEIEEGIRTPLGTKVFGAKDLPRTKLSDHLEQRLFSRLEHERAHKAKDEGKNIDEISGAENLTIRVVLSVQKQLEVKKEFLDIFPGENYPLEFPYTSKEFGSECDHPNHRCVYISYLDSVKHFRPQRETVTGEALRTFVYHNMLEKASEEDIVVGLTNIYDQFFVASERFNSNVTAAHLPYFDGDYWSGAAMAEIKKIEQETKGKCDQILGSGLSKRALQTMGHTDTSKDISKDTLVMHKLGNTISPFKEDFIIVQMQHECTLCHEVILSGKRWFCTKCKKYQQCERCRTSDTHTSTSGEKHTLYQAVVGDIPSDTKENDIAIDNDFFKNRVDFLNFCRQNHLQFDTLRHAKHSTMMIIYHLMKSNFQYVDSTCSICCKYNVSQLNWKCDICPKLAICSPCYEEKGTNCHEHKLRQCTSIANYLSQKIGSEQKTAQIRKLLKILKHASQCGSTRSQPCSYKHCSGMKKLFSHAKTCKVRVCGGCQHCTKAWTLLGHHSMECNDSECRVPRCKDLKNHMEWLARRQESRRRDAILESAREVSDHG 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2329 785 ProSiteProfiles Zinc finger TAZ-type profile. 671 755 IPR000197 -
Mibi01g2329 785 Pfam TAZ zinc finger 679 752 IPR000197 -
Mibi01g2329 785 Gene3D TAZ domain 666 780 IPR035898 -
Mibi01g2329 785 SUPERFAMILY RING/U-box 478 537 - -
Mibi01g2329 785 ProSiteProfiles Zinc finger PHD-type profile. 165 242 IPR019787 -
Mibi01g2329 785 SUPERFAMILY TAZ domain 673 760 IPR035898 -
Mibi01g2329 785 ProSiteProfiles Zinc finger ZZ-type profile. 497 558 IPR000433 GO:0008270
Mibi01g2329 785 SUPERFAMILY RING/U-box 592 654 - -
Mibi01g2329 785 PANTHER CBP/P300-RELATED 381 779 IPR013178 GO:0004402|GO:0006355|GO:0016573
Mibi01g2329 785 SMART KAT11_2 289 509 IPR013178 GO:0004402|GO:0006355|GO:0016573
Mibi01g2329 785 SMART PHD_3 167 240 IPR001965 -
Mibi01g2329 785 Gene3D - 496 545 IPR043145 -
Mibi01g2329 785 SUPERFAMILY FYVE/PHD zinc finger 200 242 IPR011011 -
Mibi01g2329 785 SMART TAZ_2 672 753 IPR000197 -
Mibi01g2329 785 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 192 240 IPR013083 -
Mibi01g2329 785 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 256 608 IPR031162 GO:0004402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2329 Mibi-ChrMibi01 36771801 36777250 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Mibi01g2329 zf-TAZ 5.7e-13 No_clan