Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2304 ATGGCATCATCTTCCCCTCCACCCAATTCTTCCCCTTCTGCAGTACCACCCACTTCATCAAATAATACAACACCACCACCTTCTTCTTCACCTTCACCTACAAATTCCTCCAAGACCCCTCCAGCTAAACCTCCTTCTCAGGCAGTGCCTTTGACTCCGCCCCCTTCTCCGTCCCTTTCACCTCCGCCGCCATCGCCACCGGCGTCTCCTCCGCCTTCATCTCCCTCAGCCCCTGCTCCAAATGCAACCTCCCCACCAACCCCTCCTAAATCATCCCCATTGCCATTGGCTCCTTCACCACCAGCTCCTAAACAAAATCCTCCCCCCTCACCTATTTCTCCAACAATTTCTCCTCCAGCCAATAACTCAACACCACCATCTTCTGCTAATCCTCCTTCTCCGCCGCGGGGGAAGGCGCCGGAAAGTAGTCCTCCACGCCCTTCAACTGCACCACCTCCATCAGTTCCTAAGTCTACTCCCTCCAAAAATGCTACCCCTCCTTCTAAAACACCTTCAACTCCTCCTTCAGTCCCTCCTCCTAAGTCTCCTCATGCTCCTTCACACAATGCATCTGCAGCTAACAGGCCCCCTCCACCCCTGTCCTATCTTCCAACGGCGTCGCCTACTAATAAATCATCTAATCATAGTAATGCATCCAAAAAGAGCGCGCCTTCGCTGTCAGGAAATGCTGGACTGGTCACAGTTATTGGCATTATATTTGGCTTTGTTGTCCTCAGCATCCTTGTTATGGGGATGTTGTTTGTATGGAGAAGGAAGAGGAAGGAAGCAAGATTGAAAGTGGGTTATACTACGCCTTCCCCTTATGCCTCTTCTCATGACTCAGGCACAACATTCTTGAGGCAACAGTCTTCCCTTTCTCATAATGGCGGTGGTAGTGATTTCACCTATTCACCAACAGAACCAGGTGGATTAAGTGGCTCAAGGTCGTGGTTTACATATGAAGAACTTGTCCAAGCAACAAATGGGTTTTCAGCACAAAATTTGTTGGGTGAAGGTGGATTTGGTTGTGTTTACAAAGGCTTTCTCATGGATGGAAGAGCAGTAGCTGTGAAACGGCTCAAAGATGGAGGTGGGCAAGGGGAGCGTGAGTTTAGAGCAGAAGTTGAAACTATCAGCCGAGTACATCATCGCCACCTTGTTTCCTTGGTGGGCTACTGTATATCTGAGCATCAGAGATTGCTGGTCTATGACTATGTTCCCAACAATACCCTTCATTACCATCTCCATGTTCAAAACAGGCCTGTTATGGATTGGGCTACAAGAGTGAAGGTTGCAGTCGGTGCAGCTCGTGGATTAGCTTACCTACATGAGGATTGCCATCCACGCATTATTCACCGAGACATAAAGTCATCGAACATCCTTCTTGATAACAACTTTGAATCTCAAGTTTCCGACTTTGGGCTTGCAAAATTAGCAATGGATTCATTTACACATATAACCACACGAGTGATGGGTACCTTTGGGTATATGGCGCCAGAATATGCAACAAGTGGTAAACTGACTGAGAAGTCAGATGTTTATTCATTTGGGGTTGTGCTTTTGGAGCTAATTACCGGTCGGAAACCTGTAGATGCCTCTCAGCCCACTGGTGATGAGAGCCTGATTGAATGGGCTCGACCTCTATTGAATCAAGTGCTTGATAATGAAGACTATGATATACTGGTAGATCCACGACTCGAGAGGAACTATAATAGAAATGAAATGTTTCGTATGATAGAGGCTGCAGCTGCCTGTGTGCGTCACTCTGCAGCAAAACGACCACGAATGACTCAGGTCGCGAGAGCTTTGGATTCAATGGATGAATTTTCAGATCTCTGTAATGGAATAAAACCTGGCCAGAGTACAACCTTTAATCCTTCACCACCATCTGAACAAGTCAGGATGTTTCAAAAGATGGTTTTCGGTGGGGCCAGTCAAGATTTCAGCTCCAGTTTCTTTAACAATTCTCAGAGTAGCTGGAGAAGCAGAGACCAGGAAGGCTCAAAACAACATGACCTCTCAAAATAA 2028 0.4719 MASSSPPPNSSPSAVPPTSSNNTTPPPSSSPSPTNSSKTPPAKPPSQAVPLTPPPSPSLSPPPPSPPASPPPSSPSAPAPNATSPPTPPKSSPLPLAPSPPAPKQNPPPSPISPTISPPANNSTPPSSANPPSPPRGKAPESSPPRPSTAPPPSVPKSTPSKNATPPSKTPSTPPSVPPPKSPHAPSHNASAANRPPPPLSYLPTASPTNKSSNHSNASKKSAPSLSGNAGLVTVIGIIFGFVVLSILVMGMLFVWRRKRKEARLKVGYTTPSPYASSHDSGTTFLRQQSSLSHNGGGSDFTYSPTEPGGLSGSRSWFTYEELVQATNGFSAQNLLGEGGFGCVYKGFLMDGRAVAVKRLKDGGGQGEREFRAEVETISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLHYHLHVQNRPVMDWATRVKVAVGAARGLAYLHEDCHPRIIHRDIKSSNILLDNNFESQVSDFGLAKLAMDSFTHITTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPTGDESLIEWARPLLNQVLDNEDYDILVDPRLERNYNRNEMFRMIEAAAACVRHSAAKRPRMTQVARALDSMDEFSDLCNGIKPGQSTTFNPSPPSEQVRMFQKMVFGGASQDFSSSFFNNSQSSWRSRDQEGSKQHDLSK 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2304 675 MobiDBLite consensus disorder prediction 288 308 - -
Mibi01g2304 675 Pfam Protein tyrosine and serine/threonine kinase 333 602 IPR001245 GO:0004672|GO:0006468
Mibi01g2304 675 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Mibi01g2304 675 MobiDBLite consensus disorder prediction 9 160 - -
Mibi01g2304 675 ProSiteProfiles Protein kinase domain profile. 330 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2304 675 MobiDBLite consensus disorder prediction 1 226 - -
Mibi01g2304 675 SUPERFAMILY Protein kinase-like (PK-like) 310 603 IPR011009 -
Mibi01g2304 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Mibi01g2304 675 MobiDBLite consensus disorder prediction 652 675 - -
Mibi01g2304 675 FunFam Proline-rich receptor-like protein kinase PERK8 302 405 - -
Mibi01g2304 675 Gene3D Transferase(Phosphotransferase) domain 1 406 614 - -
Mibi01g2304 675 MobiDBLite consensus disorder prediction 205 226 - -
Mibi01g2304 675 CDD STKc_IRAK 336 606 - -
Mibi01g2304 675 MobiDBLite consensus disorder prediction 167 185 - -
Mibi01g2304 675 SMART serkin_6 330 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2304 675 FunFam proline-rich receptor-like protein kinase PERK8 406 618 - -
Mibi01g2304 675 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 244 650 - -
Mibi01g2304 675 Gene3D Phosphorylase Kinase; domain 1 309 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2304 Mibi-ChrMibi01 35251555 35257400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2304 204 665 Trihelix Transcription Factor Family AT5G38560 65.263 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mibi01g2304 PK_Tyr_Ser-Thr 8e-46 CL0016