Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2296 ATGCTACTGCCTTGTAGAAGACTTTGCTTTCTATTTGGTTGTGATGGTTCTGTGCTGCTTAAATCTACACCTGGTAGTCCAGCAGAGAGAGACCACCCTGCAAACAACCCCAGCCTACGTGGCTTCGAGGTGATAGATGAAGCGAAGGCCGAAATAGAGGCAGTGTGTCCCCACACTGTTTCATGTGCAGACATTGTTGCTTTTGCTGCAAGAGACAGTGCCTATAAAGCAGGAGGAATGAACTATGATGTTCCTTCTGGACGAAGAGATGGCAGTGTCTCTCTCAAAGACGATATACCAAATAACATTCCTTCTCCTTCCTTCAATGCAAACCAAATCATTGAGCTTTTTACAAGAAAGGGATTATCAGTTGATGAAATGGTGACACTTTCTGGTGCTCATTCCATTGGTGTGTCTCACTGTTCTTCCTTCGATGATCGTCTTTATTCCTTCAATGGCACTCATCCACAAGACCCATCCATGGACCCTTCATTTGCTCAGCTCTTGAAGACAAAGTGTCCTCCTTCAAACAACAACAATGGTGAAGATCCGACGGTTGTGCTTGATGCTGCTACGCCTAGTCGTTTGGACAATAAGTACTATGTGGCTCTCAAGAATCATCGTGGCTTGTTGACTTCCGATCAGACTTTGTTTGACAGTGAGTCCACAAGGAAGATGGTTGTGAGAAATGTGAGAAATGGTGGGAGTTGGGCCCATAAGTTTCCGAAAGCAATGGTTCGTATGGGTTCCATTCAAGTGCTCACCGGTTCAGAGGGTGAGATCAGGAAGACATGCAGCGTCGTCAACTAA 810 0.4556 MLLPCRRLCFLFGCDGSVLLKSTPGSPAERDHPANNPSLRGFEVIDEAKAEIEAVCPHTVSCADIVAFAARDSAYKAGGMNYDVPSGRRDGSVSLKDDIPNNIPSPSFNANQIIELFTRKGLSVDEMVTLSGAHSIGVSHCSSFDDRLYSFNGTHPQDPSMDPSFAQLLKTKCPPSNNNNGEDPTVVLDAATPSRLDNKYYVALKNHRGLLTSDQTLFDSESTRKMVVRNVRNGGSWAHKFPKAMVRMGSIQVLTGSEGEIRKTCSVVN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2296 269 PANTHER PEROXIDASE 25-RELATED 9 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g2296 269 PRINTS Plant peroxidase signature 78 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g2296 269 PRINTS Plant peroxidase signature 243 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g2296 269 PRINTS Plant peroxidase signature 40 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g2296 269 PRINTS Plant peroxidase signature 187 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g2296 269 PRINTS Plant peroxidase signature 59 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g2296 269 PRINTS Plant peroxidase signature 125 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g2296 269 PRINTS Plant peroxidase signature 203 220 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g2296 269 ProSiteProfiles Plant heme peroxidase family profile. 9 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g2296 269 SUPERFAMILY Heme-dependent peroxidases 9 269 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mibi01g2296 269 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g2296 269 PRINTS Haem peroxidase superfamily signature 60 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g2296 269 PRINTS Haem peroxidase superfamily signature 78 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g2296 269 PRINTS Haem peroxidase superfamily signature 126 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g2296 269 CDD secretory_peroxidase 9 268 IPR033905 GO:0004601|GO:0042744
Mibi01g2296 269 FunFam Peroxidase 104 248 - -
Mibi01g2296 269 Pfam Peroxidase 9 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g2296 269 FunFam Peroxidase 12 116 - -
Mibi01g2296 269 Gene3D Peroxidase, domain 2 104 248 - -
Mibi01g2296 269 ProSitePatterns Peroxidases proximal heme-ligand signature. 126 136 IPR019793 -
Mibi01g2296 269 Gene3D - 9 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2296 Mibi-ChrMibi01 34991712 34992620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2296 9 269 Peroxidase AT1G14540 45.627 4.17e-73 224