Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2264 ATGTTCTTTTGGTCTCCGTTTTTCCCTTCTAGTGACTTAAGTGACAACAAGATCCATGACACAGTCCCTTACCAGTTACCGCCAAATCTGACAAGCCTGAACCTTGCGAGCAATAACTTGAGTGGAAATCTTCCTTATTCCATTTCTGCCATGACTTCACTCAATTATCTGAATGTGAGCCACAATGCACTCTCCCTTTCAATTGGAGACATTTTTGCTGACCTTGCTGATCTCAGTACCCTGGATCTATCATTCAATGACTTTTCTGGAGATCTCCCTCCCTCATTCGGTTCATTGTCCAATCTTTCTTCTGTCTTTTTGCAGAACAATCAGTTGACTGGTTCTCTTAGTGTTCTTGTTGGCTTGCCTTTAGATACATTAAATATTGCAAACAACAATTTCAGTGGATGGATACCTCATGAACTTAGTTCAATTCGTAATTTCATATCTGATGGGAACTCCTTTGACAATGGCCCTGCTCCCCCCCCTCCCCCACATACATCCCCTCCTCCAAGATCTCCTAGTCGCCATCAGCATCCTGCATCTGATTCTCATAAAGGACATGCTTCAAAATCTGACAATGAAGCTGCTGATAGCCATAAAGGCTTATCATCTGGGGCTATTATAGGCATTATTTTGGGTTCAGCTTTTCTATCTGTTGTGCTACTTGCTCTTGCTTTATGCATCCGAAAGCATAAAAGGAAGGAAAAAGGTGTAAGAACATCCAATGGAAATCCTCCTCTTGGAACCAATAATGTAAATCTTCCAATGCAAGAACAAAGGGTGAAAAGTGCTGCTGTTGTTACAGATCTGAAGCCGCCTCCTGCAGAAAAAGTAATAGCTGAGAGGGTTCCTTCAAAAAATGGATCTGCTAAGCGGATAAAATCCCCAATAACTGCTACATCATACACAATTGCTACTCTCCAAAGTGCAACAAATAGCTTCAGTCAAGAATTTATTGTTGGTGAAGGTTCTCTTGGTCGAGTTTACAGGGCTGAATTCCCTAATGGAAAAATAATGGCCATTAAGAAGATCGACAATGCAGCGCTGTCATTACAGGAGGAAGACAACTTTCTTGAAGCTGTGTCAAATATGTCACGTTTGCGGCATCCAAACATTGTTGCACTAGCTGGATACTGCGCCGAGCATGGGCAGCGCCTTCTAGTTTATGAGTATATTGGTAATGGAAATTTACATGATATGCTCCATTTTGCTGAAGATAGCAGCAAGGCTTTATCTTGGAATGCTCGTGTTCGTATAGCACTTGGCACAGCTCGAGCTTTAGAGTACTTGCATGAAGTATGCTTGCCTTCTGTTGTACATAGAAACTTTAAATCAGCAAACATATTACTCGATGAGGAGTTGAATCCTCACCTGTCTGATTGTGGTTTAGCTGCTTTAACGCCAAACACAGAACGGCAGGTTTCGACTCAGATGGTTGGCTCATTTGGTTATAGTGCTCCTGAGTTTGCATTATCAGGAATATACACAGTAAAAAGTGACGTTTACAGTTTTGGAGTGGTAATGTTAGAGCTGTTGACAGGCCGAAAGCCACTTGACAGTTCACGAGCCAGATCAGAGCAATCACTTGTGAGATGGGCTACCCCCCAACTTCATGATATAGATGCCTTGGCCAAAATGGTTGATCCTGCTTTGAATGGCATGTATCCTGCGAAATCCCTGTCACGCTTTGCCGATATAATCGCACTCTGTGTTCAGCCGGAGCCAGAATTTCGACCTCCCATGTCTGAGGTTGTGCAAGCATTGGTCCGGTTGGTGCAAAGAGCGAGTGTGGTTAAACGCCGGCCCAGTGACGAAACTGGGTTTGGTCACAAGACCCCAGATCATGAATCCTTTGACATGTCATTTTAA 1872 0.4322 MFFWSPFFPSSDLSDNKIHDTVPYQLPPNLTSLNLASNNLSGNLPYSISAMTSLNYLNVSHNALSLSIGDIFADLADLSTLDLSFNDFSGDLPPSFGSLSNLSSVFLQNNQLTGSLSVLVGLPLDTLNIANNNFSGWIPHELSSIRNFISDGNSFDNGPAPPPPPHTSPPPRSPSRHQHPASDSHKGHASKSDNEAADSHKGLSSGAIIGIILGSAFLSVVLLALALCIRKHKRKEKGVRTSNGNPPLGTNNVNLPMQEQRVKSAAVVTDLKPPPAEKVIAERVPSKNGSAKRIKSPITATSYTIATLQSATNSFSQEFIVGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVALAGYCAEHGQRLLVYEYIGNGNLHDMLHFAEDSSKALSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRARSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSDETGFGHKTPDHESFDMSF 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2264 623 Pfam Protein kinase domain 318 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2264 623 Pfam Leucine rich repeat 28 88 IPR001611 GO:0005515
Mibi01g2264 623 Gene3D Phosphorylase Kinase; domain 1 277 392 - -
Mibi01g2264 623 SUPERFAMILY L domain-like 12 147 - -
Mibi01g2264 623 CDD STKc_IRAK 321 592 - -
Mibi01g2264 623 Gene3D Transferase(Phosphotransferase) domain 1 393 610 - -
Mibi01g2264 623 MobiDBLite consensus disorder prediction 234 254 - -
Mibi01g2264 623 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 8 166 - -
Mibi01g2264 623 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 393 603 - -
Mibi01g2264 623 SUPERFAMILY Protein kinase-like (PK-like) 294 589 IPR011009 -
Mibi01g2264 623 ProSiteProfiles Protein kinase domain profile. 315 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2264 623 MobiDBLite consensus disorder prediction 603 623 - -
Mibi01g2264 623 MobiDBLite consensus disorder prediction 153 200 - -
Mibi01g2264 623 MobiDBLite consensus disorder prediction 157 176 - -
Mibi01g2264 623 Gene3D Ribonuclease Inhibitor 3 163 IPR032675 -
Mibi01g2264 623 PANTHER LEUCINE RICH REPEAT KINASE 2 12 596 - -
Mibi01g2264 623 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 281 392 - -
Mibi01g2264 623 MobiDBLite consensus disorder prediction 178 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2264 Mibi-ChrMibi01 34218670 34223334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2264 51 623 Strubbelig Receptor Gene Family AT4G22130 72.743 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mibi01g2264 Pkinase 4.6e-44 CL0016