Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2250 ATGGACTGGTCTAGGGGACCCACCGTCGGCCATGGCGCCACAGCCACCGTCTCCCTCGCCCACGATCACTGGTCCGGTCGCTTGTTCGCGGTCAAGTCCTCCAAGCTCAACCAATCGGAGTTACTTCAAAGGGAACAGAAAATTCTGTCCACATTGAAATCACCTCACATAGTATCATACCAAGGTCATGATGTCACATTAGAGAACAATGTACAATGGTACAATCTTATCATGGAGTATGCTCCTTATGGCACGGTCTCTGACATGGCTCGCCGGCGAGACGGGCTAGAAGAGGCGATGGTTAAAGCCTATACGCGCCAAATCTTGATGGGGCTTGACCATCTTCATAGTAATGGCATTGTGCATTGTGATATTAAAGGTAACAATGTTTTGGTTACAGAGGAAGGGGTCAAAATTGCTGACTTTGGTTGTGCTCGGAGGGTGTCTGACCCGGCGGGTCACGCCGGAGTCTTCGCCGGAACGCCGGTGTTCATGGCGCCGGAGGTGGCGCGTGGGGAGCAACAGGGGTTCGCCGCCGATGTGTGGTCTTTGGGGTGTACTGTATTGGAGATGGTCACGGGTCGGGTTCCGTGGCCGGATGTATCCGACCCGGTGAGCGCGGTTTATCGGGTCGGGTTTTCCGGGGACGTGCCGGAGATTCCCGGGTTTTTGTCGGAGCAAGGGAGGGACTTTTTGGGCAAGTGTCTGAGGAGAGACCCGAATGAGAGGTGGTCTGTTGATGAACTTCTCAGGCATGAATTTGTGGAGGAATTAATTCCATTTTCTTCCATGAAAGAATTTGGAAGCTTGAAATTGGATAGTCCGACTGGTGTAATGGATGGATCCATATGGGATTCTTGGGACCCGACCCGTATTTGTTTATTCAATTCTGGGAGAGATAGGATTCGTATGTTGTGTGAAGAAGCTACGACGTCGTTTGATGGTAATGAGCTGAATTGGGAATGGGAAGAAGGTTGGGTCACAGTGAGAAATGGAAATGAGATGAGAGAGAATTACGATATTGGCCTTGGAAATGAGAGAAGTTTGGTGTGTTATGAACCCAGAACGGTAATTACTGTTCGGGTGTGTCTGTGTGATGTTGATTGTAAGGTTAATGGTTGTAAGGAAGGATTATTGTTAGGTTATTATGATTGGTCATGTGTAAGAATTATTGTTGCTCGGAAAAGAGAAATTGAATCTCAAAATAAGGAAATAATTGTTCATGATTTTCTTCTGTCTCTCTCTTTCTCACTCGCTCTATAA 1263 0.4798 MDWSRGPTVGHGATATVSLAHDHWSGRLFAVKSSKLNQSELLQREQKILSTLKSPHIVSYQGHDVTLENNVQWYNLIMEYAPYGTVSDMARRRDGLEEAMVKAYTRQILMGLDHLHSNGIVHCDIKGNNVLVTEEGVKIADFGCARRVSDPAGHAGVFAGTPVFMAPEVARGEQQGFAADVWSLGCTVLEMVTGRVPWPDVSDPVSAVYRVGFSGDVPEIPGFLSEQGRDFLGKCLRRDPNERWSVDELLRHEFVEELIPFSSMKEFGSLKLDSPTGVMDGSIWDSWDPTRICLFNSGRDRIRMLCEEATTSFDGNELNWEWEEGWVTVRNGNEMRENYDIGLGNERSLVCYEPRTVITVRVCLCDVDCKVNGCKEGLLLGYYDWSCVRIIVARKREIESQNKEIIVHDFLLSLSFSLAL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2250 420 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Mibi01g2250 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Mibi01g2250 420 SUPERFAMILY Protein kinase-like (PK-like) 3 265 IPR011009 -
Mibi01g2250 420 ProSiteProfiles Protein kinase domain profile. 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2250 420 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 332 - -
Mibi01g2250 420 Pfam Protein kinase domain 6 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2250 420 CDD STKc_MAPKKK 2 255 - -
Mibi01g2250 420 Gene3D Transferase(Phosphotransferase) domain 1 2 275 - -
Mibi01g2250 420 SMART serkin_6 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2250 Mibi-ChrMibi01 34006435 34007697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2250 1 330 MAP Kinase Kinase Kinase AT2G32510 46.742 6.11e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mibi01g2250 Pkinase 4.9e-56 CL0016