Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2221 ATGTCTTGCACGATTTCCATGGCTTTGTTTTCATTCCTTTCTCATCTCATCATTCTAACTTTTGCCCGGCAACATGATGACTTCATCGCACTGCTTAACTTCAGCAAACTCATACGGTGGGATTGCTTCGATGAAAATGGAAACGAGTTCAGTGATACAGGTACCTACGACTTCAACCTCAAGAACCTTCTTTATAGTAATCTCACTTCCGACCAAAACATTGACTATGGCTTCTACAATAAGTCTCAGGGTCAAGTCCCCAATCGAGTTAGTGCAATTGGGATGTGTAGAGGAGATGTAAAGTCAGATGATTGTATTCGTTGCCTCCACAACGCAACTTCGCTTCTCCTACACGAATGTCAAAATCAAACAGAAGCGATGGGATACGGTGACGGTTGCATGTTACGGTACTCAGACCAGTCAATATTTGGGTCATATCAGAAACCCGACTTCTACTTTTCATATTATAATGGAGATACTTCAAAAGATAGGAACTTCAATAAGACGGTTAATGACCTGTTGCAAAATCTAACAGCAAAAGCTGCAGCTGGTGACTCACGTCGTAAGTTTGCAGCATCGGCTGCAGATGGATTTTTTGTGGAACCTATTTATGGTCTTGTTCAGTGCACTCCTGATTTGTCTGAGCGAAGCTGCCAAGAGTGCCTGCAGAAGGCTATCTTGGAAATCAATGGAGATTGTTGTGTGAACCAGATAGGTGCAAGGATTGTCAAACTCAGCTGCAGTGTTAGATATGAGAAGTATGAATTCTATGATAAATCTGTTATCGATTCATTACAACCATCTCTTCCTCCATCATCTGCCCCTACTTCCCATACCACTCCTTCATCAACAGGAGGTAGCAGCAGCAGGTCAATAATTGTCATAATTTTCTTCACTGTTCTGGCTGTTGCAATTATCGTAGTTGTCTCCTCCCTTTGCGTCTATTCTCGATTGAGGAGATCAAGAAAAACCTTTGAAAATACAGTCGAACTTGAAAATAATCAAGATGAAATCACACCAATTGACTCATTGCAATTCGACTTTAATACCATCAGGCTCGCTACAGATAACTTTTCTATTGAAAATAAGCTTGGACAAGGAGGATTTGGAACAGTATTTAAGGGTAGGCTCTCCAGTGGAAGAGAAATTGCTGTCAAAAGGCTGTCCATGGATTCTCAGCAAGGAGATTCAGAATTTAAAAATGAAGTGTTGTTGGTGGCCAAGCTTCAACACCGTAATTTAGTGAAACTACTTGGTTTCTGTTTAGAGAAAAAAGAAAGGTTACTTGTTTATGAATTTCTTCCGAATAAAAGTCTTGATTACTTGCTATTTGATCCAAATCAACGAGCTCACCTAAATTGGGAAATGCGATTCAAAATCATAGGAGGCATTGCACGGGGCCTTCTATACCTTCATGAGGATTCAAGGTTACGTATTATTCATCGTGATCTCAAAACAAGTAACATTCTTCTAGATGAAGAGATGAATCCTAAAATATCAGATTTTGGTATGGCAAGACTGTTTTACATTAATCAAACCCAAAGCAATACCAGTAGAATTGTTGGGACCTATGGATATATGGCACCAGAATATGCAATGCATGGACAATTTTCAGTAAAATCAGATGTTTTCAGTTTTGGCATATTAGTTTTAGAGATTCTAAGCGGAAAGAAAAATAATACCATCTTTCATGAGGAGAATGCCCACGATCTATTAAGCTTTGCATGGAAAAATTGGAGGGAAGGGACAACCTCAAATATAATAGATTCACTATTAATTGATGGGTCAAGCAAGGAAATGACAAGATGCATCCACATTGGTTTACTATGTGTTCAAGAAAATATAGGAGACCGGCCGACCATGGCTAACGTTGCACTTATGCTTAGCAGCCACTCATTCTCTCTACCATTACCTGCACAACCTGCATTTTTAATGAATTACAGAACTTTACCAGAGAAGCATTCTGGGGATTGTAGTTCAGGAGTGACAAGATCCAGTGAACGAGACGCTACTACTAGCTCTATTCAAGCATCAAGTGGGCGAGAATATAACCCTGTTCATGAATAA 2067 0.3967 MSCTISMALFSFLSHLIILTFARQHDDFIALLNFSKLIRWDCFDENGNEFSDTGTYDFNLKNLLYSNLTSDQNIDYGFYNKSQGQVPNRVSAIGMCRGDVKSDDCIRCLHNATSLLLHECQNQTEAMGYGDGCMLRYSDQSIFGSYQKPDFYFSYYNGDTSKDRNFNKTVNDLLQNLTAKAAAGDSRRKFAASAADGFFVEPIYGLVQCTPDLSERSCQECLQKAILEINGDCCVNQIGARIVKLSCSVRYEKYEFYDKSVIDSLQPSLPPSSAPTSHTTPSSTGGSSSRSIIVIIFFTVLAVAIIVVVSSLCVYSRLRRSRKTFENTVELENNQDEITPIDSLQFDFNTIRLATDNFSIENKLGQGGFGTVFKGRLSSGREIAVKRLSMDSQQGDSEFKNEVLLVAKLQHRNLVKLLGFCLEKKERLLVYEFLPNKSLDYLLFDPNQRAHLNWEMRFKIIGGIARGLLYLHEDSRLRIIHRDLKTSNILLDEEMNPKISDFGMARLFYINQTQSNTSRIVGTYGYMAPEYAMHGQFSVKSDVFSFGILVLEILSGKKNNTIFHEENAHDLLSFAWKNWREGTTSNIIDSLLIDGSSKEMTRCIHIGLLCVQENIGDRPTMANVALMLSSHSFSLPLPAQPAFLMNYRTLPEKHSGDCSSGVTRSSERDATTSSIQASSGREYNPVHE 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2221 688 Pfam Salt stress response/antifungal 161 254 IPR002902 -
Mibi01g2221 688 Pfam Salt stress response/antifungal 42 139 IPR002902 -
Mibi01g2221 688 CDD STKc_IRAK 364 628 - -
Mibi01g2221 688 FunFam cysteine-rich receptor-like protein kinase 10 434 635 - -
Mibi01g2221 688 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 38 659 - -
Mibi01g2221 688 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Mibi01g2221 688 FunFam Cysteine-rich receptor-like protein kinase 10 319 433 - -
Mibi01g2221 688 MobiDBLite consensus disorder prediction 656 681 - -
Mibi01g2221 688 MobiDBLite consensus disorder prediction 653 688 - -
Mibi01g2221 688 Gene3D Phosphorylase Kinase; domain 1 319 433 - -
Mibi01g2221 688 Gene3D - 151 256 IPR038408 -
Mibi01g2221 688 Gene3D - 37 141 IPR038408 -
Mibi01g2221 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Mibi01g2221 688 ProSiteProfiles Gnk2-homologous domain profile. 37 142 IPR002902 -
Mibi01g2221 688 SMART serkin_6 358 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2221 688 SUPERFAMILY Protein kinase-like (PK-like) 346 652 IPR011009 -
Mibi01g2221 688 FunFam Cysteine-rich receptor-like protein kinase 10 151 256 - -
Mibi01g2221 688 Gene3D Transferase(Phosphotransferase) domain 1 434 634 - -
Mibi01g2221 688 Pfam Protein kinase domain 359 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2221 688 ProSiteProfiles Gnk2-homologous domain profile. 148 256 IPR002902 -
Mibi01g2221 688 MobiDBLite consensus disorder prediction 268 288 - -
Mibi01g2221 688 ProSiteProfiles Protein kinase domain profile. 358 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2221 Mibi-ChrMibi01 33594929 33598352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2221 76 673 Receptor kinase-like Gene Family AT4G21410 48.780 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g2221 Pkinase 2.6e-47 CL0016