Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2219 ATGAGTTCAGCATTCATCATAGTTTTATATTTACTATGGCTTGCATCAACATTGACACTCCTAAATGGAGCATCAAGGGAAGTAGCTCCAAATCCCGAAGTTGTGAAAGTTGGAGCTATTTTCACGTTTAAAACTATAAATGGACAAGTTTCTAAAGCTGCCATCAAAGCTGCAGAGAAAGATGTGAATTCTGATCCACGCATCCTTGGTGGACGCAAATTGTCCATAACCCTACACGATGCCAACTTCAATGGTTTCCTTAGCTTCATTGGAGCTCTCAAGTTCTTGGGGAGAGACTCAGTTGCTATTATCGGTCCACAAACTTCAGCAATGGCTCCTGTGCTCTCACATTTGTCAAATGAACTCCATGTTCCCATTCTGTCATTTACAGCTCTCGATCCTACCCTGTCACCTCTGCAGTACCGTTATTTTCTGCAAACAGCGCCCAATGATAAATTCCTCATGACTGCAGTGGCCGACATGATTAGCTATTTTGGTTGGAGAGAGATTGTTGCTGTTTATACTGATGAAGATCAAAATAGAAATGGTATTGCTGTATTGGGTGATAAACTTGCTGAAAAGCGCAGTAAGATATCTTACAAAGCAATACTGCCCCCTGATCCAACTGCTAGTCGAAATGATATTACTACTCAGTTGGCCAAGGTTAAAAGTGTGGAGGCCAGAGTGATTGTTCTACACACCTTCGCCCATACCGGTCTCATGGTTTTTGATGTGGCTAAGGAATTAGGAATGATGAGTGAAGGTTATGTCTGGATAACTTCTTCTTGGTTATCAACTGTTTTTGACTCAAATTCAACACTTTCTTTGCACATTTCTAACTCAATCCAAGGAGTTCTTACGCTTCGCCCTCACACCCCACCAACAAAAAGAAAGCAAGCCTTTAAGTCCAGGTGGAACCAGATAAGTAATGGTTCAGTTGGGTTGAATCCATATGGACTCTATGCATATGATTCTGTTTGGATCATTGCGCTTGCGTTGAAATCATTTTTTGATCAGAATGGCAATCTTTCATTCTCTTACAATACAAATTTAGACAGTATGAGAAGGGAGAGTCTGGACCTTGGTGCACTGAGCGTTTTTAATGGAGGGAAGCAATTGCTTGATAACATACTGCGCATTAACATGACTGGATTGACAGGACCTGTTCAATTTCATTCAGATAGATCCCCCTTAAACCCATCATATGACATCCTCAATGTAATTAATAGTACTTATAGGAAAATTGGGTACTGGTCTAATTATTCTGGGCTGTCTGTTATTCCTCCTGAGAAACTTCACACTAAGCAAGCCAACCGATCGTTTTTAAACCAGCATCTGTCCAATATAACTTGGCCTGGTGGTACAACAAATAAGCCTCGGGGATGGGTTTTTCCAAATAATGGAAGGCAGCTTAGAATTGGTGTCCCCAATCGAGTTAGTTATCAGAACATGGTCTCACAAATAAATGGTACCGATAAAGTTCAAGGATACTGCATAGATGTCTTCCTGGCTGCCATTAAATTGCTACCATATGCAGTTCCATACAAGTTTGTTCTATTTGGAGATGGACATAAGAACCCAAACTACTATGAACTTGTCAATAAGATCAATTCTGATGTGTTTGATGCTGCTATAGGTGACATTGCCATTGTCACTGACCGAACAAAGATTGCGGATTTTACTCAACCATATACAGAGTCAGGCCTTGTGGTGGTTACAAAAGTAAAAGAATTTAAGTCAAGTGCTTGGAATTTCTTGCGACCTTTTACTCCATTAATGTGGGGTGTCACCGCTGTTTTCTTCCTCATTGTTGGAACAGTTGTGTGGATTCTTGAACATAGAACAAATGATGAGTTTCGGGGGCCTCCAAGGAAACAACTTGTTACAGTTCTTTGGTTTAGCCTCTCCACCATGTTCTTTGCACACAGAGAGAACACAGTTAGTGCACTTGGTCGTATTATACTAATCATCTGGCTTTTTGTGGTTTTGGTAATCAATTCAAGCTATACTGCAAGCCTAACATCAATCCTCACTGTGCAACAACTTTCCTCGCCAATAACAGGAATTGATACCTTGATAACCAGTAATGAACGTATAGGATTTCAAGTAGGATCATATGCTGAAAACTATCTTAATCAGGAACTCAACATCCCAAAATATAGACTTATTCCTCTTGGTTCACCAGAAGAATATGCCATCGCTCTCGAAAGGGGGACTGTCGCAGCTGTTGTTGATGAACGGCCATATATAGAACTCTTCATGTCAAAGCACTGCAAATTCTCCATTAGAGGCCAAGAGTTCACCAAAAGTGGATGGGGATTTGCCTTCCGAAAGGACTCTCCTTTATCCATTGATATGTCAACTGCCATTCTGACTCTGTCTGAAAATGGTGGACTCCAGAGGATTCATGAGAAGTGGCTCTCAACGCGGGCTTGTGCATTTAAAAGCACAGAGGAGGGATCTGAGCAACTTCAGTTAGAAAGCTTTTGGGGCCTGTTTCTGTTATGTGGGATAGTAAGTTTCCTAGCACTTCTTGTCTATTTCATTTTGATGATCCTCCAATTCTGCCGTGACTTCCCCAAAAATGGCGCTCCTTCTAACCGTAGTAGCTCGCGCTCTGCACGCATCCAGACATTTCTAAGTTTTGCTGATGAAAAAGAAGACATGTCACAGAGAAAGCTTAAAAGAAAACGCAGGGATTTTTCATAG 2709 0.412 MSSAFIIVLYLLWLASTLTLLNGASREVAPNPEVVKVGAIFTFKTINGQVSKAAIKAAEKDVNSDPRILGGRKLSITLHDANFNGFLSFIGALKFLGRDSVAIIGPQTSAMAPVLSHLSNELHVPILSFTALDPTLSPLQYRYFLQTAPNDKFLMTAVADMISYFGWREIVAVYTDEDQNRNGIAVLGDKLAEKRSKISYKAILPPDPTASRNDITTQLAKVKSVEARVIVLHTFAHTGLMVFDVAKELGMMSEGYVWITSSWLSTVFDSNSTLSLHISNSIQGVLTLRPHTPPTKRKQAFKSRWNQISNGSVGLNPYGLYAYDSVWIIALALKSFFDQNGNLSFSYNTNLDSMRRESLDLGALSVFNGGKQLLDNILRINMTGLTGPVQFHSDRSPLNPSYDILNVINSTYRKIGYWSNYSGLSVIPPEKLHTKQANRSFLNQHLSNITWPGGTTNKPRGWVFPNNGRQLRIGVPNRVSYQNMVSQINGTDKVQGYCIDVFLAAIKLLPYAVPYKFVLFGDGHKNPNYYELVNKINSDVFDAAIGDIAIVTDRTKIADFTQPYTESGLVVVTKVKEFKSSAWNFLRPFTPLMWGVTAVFFLIVGTVVWILEHRTNDEFRGPPRKQLVTVLWFSLSTMFFAHRENTVSALGRIILIIWLFVVLVINSSYTASLTSILTVQQLSSPITGIDTLITSNERIGFQVGSYAENYLNQELNIPKYRLIPLGSPEEYAIALERGTVAAVVDERPYIELFMSKHCKFSIRGQEFTKSGWGFAFRKDSPLSIDMSTAILTLSENGGLQRIHEKWLSTRACAFKSTEEGSEQLQLESFWGLFLLCGIVSFLALLVYFILMILQFCRDFPKNGAPSNRSSSRSARIQTFLSFADEKEDMSQRKLKRKRRDFS 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2219 902 Gene3D - 466 581 - -
Mibi01g2219 902 SUPERFAMILY Periplasmic binding protein-like II 448 807 - -
Mibi01g2219 902 Gene3D - 53 399 - -
Mibi01g2219 902 FunFam Glutamate receptor 708 811 - -
Mibi01g2219 902 Pfam Receptor family ligand binding region 52 408 IPR001828 -
Mibi01g2219 902 Gene3D - 771 806 - -
Mibi01g2219 902 Pfam Bacterial extracellular solute-binding proteins, family 3 489 808 IPR001638 -
Mibi01g2219 902 Gene3D - 582 714 - -
Mibi01g2219 902 FunFam Glutamate receptor 582 712 - -
Mibi01g2219 902 FunFam Glutamate receptor 150 310 - -
Mibi01g2219 902 PIRSF IGluLR_plant 2 901 IPR017103 -
Mibi01g2219 902 Pfam Ligand-gated ion channel 809 838 IPR001320 GO:0015276|GO:0016020
Mibi01g2219 902 Gene3D - 150 424 - -
Mibi01g2219 902 SMART AABind_6 470 810 IPR001638 -
Mibi01g2219 902 CDD GluR_Plant 469 807 - -
Mibi01g2219 902 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 48 64 - -
Mibi01g2219 902 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 108 136 - -
Mibi01g2219 902 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 322 334 - -
Mibi01g2219 902 Gene3D - 741 770 - -
Mibi01g2219 902 SUPERFAMILY Periplasmic binding protein-like I 30 463 IPR028082 -
Mibi01g2219 902 FunFam Glutamate receptor 466 582 - -
Mibi01g2219 902 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 870 - -
Mibi01g2219 902 SMART GluR_14 472 809 IPR001320 GO:0015276|GO:0016020
Mibi01g2219 902 CDD PBP1_GABAb_receptor_plant 36 428 IPR044440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2219 Mibi-ChrMibi01 33552206 33556326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2219 32 900 Ion Channels AT2G17260 61.023 0.0 1121