Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2209 ATGGAAGCGAAGAACTTGATGAACTCAAATCATACAAGCAAAATTGCCGAAGCTGATGATGCTGAGCAGCAAGTAGAATTCTCTGAGGATGAGGAAGCGCTCATCGCTAGAATGTTCACATTGGTTGGGAAAAGGTGGTCTTTGACTGCAGGGAGAATACCCGGAAGAACTGCACAAGAGATAGAAAAGTACTGGACTTCTAAGTTCTCTCCATGA 216 0.4398 MEAKNLMNSNHTSKIAEADDAEQQVEFSEDEEALIARMFTLVGKRWSLTAGRIPGRTAQEIEKYWTSKFSP 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2209 71 MobiDBLite consensus disorder prediction 1 24 - -
Mibi01g2209 71 Pfam Myb-like DNA-binding domain 26 66 IPR001005 -
Mibi01g2209 71 SMART sant 23 71 IPR001005 -
Mibi01g2209 71 Gene3D - 26 69 - -
Mibi01g2209 71 CDD SANT 26 65 IPR001005 -
Mibi01g2209 71 FunFam MYB-like transcription factor 26 68 - -
Mibi01g2209 71 SUPERFAMILY Homeodomain-like 26 69 IPR009057 -
Mibi01g2209 71 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Mibi01g2209 71 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 71 IPR017930 -
Mibi01g2209 71 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 25 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2209 Mibi-ChrMibi01 33447995 33451453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2209 27 70 MYB Transcription Factor Family AT5G14750 50.000 7.53e-13 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi01g2209 Myb_DNA-binding 2.2e-06 CL0123