Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2193 ATGGGTCGCTTTTCCTGTTGCATTACCTCGCCGGATAAAGTAATCGGTGCAGATGGTTCATCAGAAGTTTCGAAACGCAGGGCACGATTGAAATCCTATACATTGAAATCAATTATTTCAAATATTTCACTCAGGACAGGTAGCAGCAGGCACAGAAGGATAATCGCAGAGATAGAAAAGCATGGAATTGTACAAAATGAAGCTATAATTTTCACATATAAAGAACTCGATGATGCAACTGACGGATTCAGCAATAAACACAGAATAGGCGAGGGGGGGTTCGGGGGTGTCTTCAAAGGACGTATAGAAAGCATTGATCAAGTCGTGGCTGTGAAGCAACTGGACAGACAAGGAAGGCAAGGAACTAAAGAATTCATCTCAGAGGTTTTGATGTTAAGCTTGTTGAAGCATTCAAACCTTGTCAATTTGATTGGTTATTGTGTTGAAGATGACCACAGGATTTTGACCTATGAATACATGCCCAATGGGAGTCTAGAAGATCACCTTCTGGACTTGGCTCCAAATAAGGCTCCTTTATCATGGGATGTGAGAATGAGAATAGCTCTGGGAGCTGCAAGAGGGCTTGAGTACCTACATGAAATTGCTGAGCCAAAAGTAATATACCGTGATTTTAAAGCGTCAAATATACTGTTAGATGATGATTTCAATCCCAAGCTTTCTGATTTTGGAATGGCCAAGATGGGTCCAGCACAAGGCCAACTTTATATCACCACAAGGGTCGTGGGTACCTATGGCTATTGTGCACCAGAATATGTGGCTACTGCACAACTAACATCCAAGTCTGATGTTTATAGCTTTGGGGTTGTCCTTTTGGAGATAATCTCTGGCAGAAGAGTTATTGATGTTACAAGAGCAGCAGACGAGCAGAACTTGATCCAATGGGCACAACCTCTGTTCAAGGACAGAAGCAAGTTTACTCAAATGGCTGACCCCTTGCTTGATGGTAACTACCCTGAGAAGAGTTTAATTCAAGCACTTGCAGTGGCAGCAATGTGTTTGCAAGAAGCAGCTGAGGCAAGACCTTCAATGGGTGAGGTTGTGGAAGCTCTTGAGATTCTAACAAACTGTGCGACTTCTCGTTTTCCTCTTCGAAGTCATAATCAAGACCCAGAACTTGGTAGAGATCCAACGCTCCTCCTTGTACGGAATTAG 1173 0.4297 MGRFSCCITSPDKVIGADGSSEVSKRRARLKSYTLKSIISNISLRTGSSRHRRIIAEIEKHGIVQNEAIIFTYKELDDATDGFSNKHRIGEGGFGGVFKGRIESIDQVVAVKQLDRQGRQGTKEFISEVLMLSLLKHSNLVNLIGYCVEDDHRILTYEYMPNGSLEDHLLDLAPNKAPLSWDVRMRIALGAARGLEYLHEIAEPKVIYRDFKASNILLDDDFNPKLSDFGMAKMGPAQGQLYITTRVVGTYGYCAPEYVATAQLTSKSDVYSFGVVLLEIISGRRVIDVTRAADEQNLIQWAQPLFKDRSKFTQMADPLLDGNYPEKSLIQALAVAAMCLQEAAEARPSMGEVVEALEILTNCATSRFPLRSHNQDPELGRDPTLLLVRN 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2193 390 Gene3D Phosphorylase Kinase; domain 1 44 159 - -
Mibi01g2193 390 Gene3D Transferase(Phosphotransferase) domain 1 160 375 - -
Mibi01g2193 390 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Mibi01g2193 390 SUPERFAMILY Protein kinase-like (PK-like) 65 360 IPR011009 -
Mibi01g2193 390 FunFam Serine/threonine-protein kinase PBS1 160 375 - -
Mibi01g2193 390 PANTHER OS07G0668900 PROTEIN 52 363 - -
Mibi01g2193 390 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 57 159 - -
Mibi01g2193 390 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2193 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Mibi01g2193 390 CDD STKc_IRAK 89 360 - -
Mibi01g2193 390 Pfam Protein kinase domain 84 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2193 Mibi-ChrMibi01 33204478 33207662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2193 68 384 Glycoside Hydrolase AT3G07070 62.145 1.93e-141 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mibi01g2193 Pkinase 9.5e-49 CL0016