Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2179 ATGGTTGATTCTCCAAAGCTATTCCTCCTTCTTCTCTGCACTATTTCTTTCTTCTCAAGCTTTTCCTTCGCTGACCCACCATATCAAAATTGTTCAACAAGCAGTAACTACACCAATGGAAGCTCCTTTCAGCACAACCTTAACAACATCCTCAATTCTCTATCTTCTCATGCTTCAATCTCAAAATCTGATAATGTCTCTTATGGGAAAAACCCAGACAAAGTCTATACCCTCTTCATGTGTCTCGACTATGGTTCAAATCAAACATGCCAAGATTGTATTGCCACGGCAGCACAAGACATTCTTAAACTCTGTCCCCAATCAGAAGAAGCAGTCGTTTGGGAAGAACAATGCCAACTACGATATTCCAGCAACAACTTCCTTGGAAAAATGGATCTCACAGGAAAATTGGGGTTTGATAATAAGCAGAATATATCAGAACCAATGAAGTTTGAGTCTGAGGTTAATGCGTTATTATATAGTCTTACTGATAAGGTATCTTCCAATGTTTCTGCTAACTTGTATGCTATAGGAGAGGCACCTTTTGAAGATAAAACAATATATGGGTTAGTTCAGTGCACAGGAGATTTATCAGCTAGTGATTGTAGTACATGCCTGAAAAGTGCCATAAGTTATCTACCTGTTTGTTGTTATTCCTCAATTGGAGCTAGAGTTCTAAGTCGTAGCTGCTACTTGAGATTTGAGTTATATGCATTTTATAATGGTGAACCTGATCCAAATGTTCCATTTACATCAAGTAGAAAAAGTACTCCAAGAAAAGCAGTGATGATTGTGGGAATTATAGCAGCGACTGGATTGGCTATGGCAATTTTAAGTTTCTGTGTTTACTTCCTAAGGAAGAAGAGAACTCAGAAAAGCAAGGGCGGAATATACAGTCATGTGATCGATCTTCATAGCTTTGGGCAGACATGTGAAACAGTGCTCCAAAATAACCAGAATTTTTGGGGAAGAAATGACAAGATATCCGAGGATTTGCCTTATTTTGATCTTGAAACTCTATGTGTTGCTACCAAAAACTTTTCTGATTCAAATAAGCTTGGTCAAGGTGGCTTTGGCCCTGTTTATAAGGGTGTATTAAGTGATGGCCAAGAAGTAGCAATCAAGAGGCTTTCAACAGGCTCTGAACAGGGCTCAGAAGAATTCATAAACGAGGTTCTTCTGATTCTGAAACTTCAACATAAAAATCTAGTGAGGCTTCTCGGATTTTGTTTAGATGGAGAAGAAATGCTTCTTGTTTATGAATTTCTGCCTAATAGAAGCCTTGATGAAGTCCTTTTCGATCCAAGGCAACGTGCACGACTAAGTTGGATCAAACGTGTTGATATAATAGGTGGAATAGCAAGAGGCATTCTTTATCTTCATGAAGATTCTCGATTAAAGATTATTCATAGAGACCTAAAAGCAAGTAATATATTGTTAGACCGTGACATGAACCCAAAAATCTCAGACTTTGGAATGGCGAGAATATTTGCCGGAACTGAAGGTGAAGCTAATACTTCTACTATAGTTGGCACATATGGATACATGGCTCCAGAATATGCTATGGAGGGACTATACTCCATAAAATCTGATGTCTTTAGTTTTGGAGTTTTATTGCTTGAAATTATCACTGGGAGACACAATGCAGGTTTCCATCACTCTAAACATGCTCCTAGCCTTCTGGCATATGCATGGCATCTATGGAATGAGGGAAATGCACTGGAATTGATGGATCCTCTAGTAGCTGATTCCTGCCCTAAAGATCAATTTCTAGTATATATGCATGTTGGATTGCTATGTGTTCAAGAAGATGCATATGATAGACCAACCATGTCTTCTATTGTTTTAATGTTGAAAAGTCAATCGTCAACTCTTGGTCAACCCCAAAAGCCACCCTTCTGTGCGGGAAGAATAATTGATAATGATCATAATAATGTGACAGAAAATGAACAATGCTCAGTCAATAACTAA 1971 0.3825 MVDSPKLFLLLLCTISFFSSFSFADPPYQNCSTSSNYTNGSSFQHNLNNILNSLSSHASISKSDNVSYGKNPDKVYTLFMCLDYGSNQTCQDCIATAAQDILKLCPQSEEAVVWEEQCQLRYSSNNFLGKMDLTGKLGFDNKQNISEPMKFESEVNALLYSLTDKVSSNVSANLYAIGEAPFEDKTIYGLVQCTGDLSASDCSTCLKSAISYLPVCCYSSIGARVLSRSCYLRFELYAFYNGEPDPNVPFTSSRKSTPRKAVMIVGIIAATGLAMAILSFCVYFLRKKRTQKSKGGIYSHVIDLHSFGQTCETVLQNNQNFWGRNDKISEDLPYFDLETLCVATKNFSDSNKLGQGGFGPVYKGVLSDGQEVAIKRLSTGSEQGSEEFINEVLLILKLQHKNLVRLLGFCLDGEEMLLVYEFLPNRSLDEVLFDPRQRARLSWIKRVDIIGGIARGILYLHEDSRLKIIHRDLKASNILLDRDMNPKISDFGMARIFAGTEGEANTSTIVGTYGYMAPEYAMEGLYSIKSDVFSFGVLLLEIITGRHNAGFHHSKHAPSLLAYAWHLWNEGNALELMDPLVADSCPKDQFLVYMHVGLLCVQEDAYDRPTMSSIVLMLKSQSSTLGQPQKPPFCAGRIIDNDHNNVTENEQCSVNN 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2179 656 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 311 422 - -
Mibi01g2179 656 ProSiteProfiles Protein kinase domain profile. 347 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2179 656 Pfam Protein tyrosine and serine/threonine kinase 350 616 IPR001245 GO:0004672|GO:0006468
Mibi01g2179 656 Gene3D - 137 239 IPR038408 -
Mibi01g2179 656 Gene3D - 26 127 IPR038408 -
Mibi01g2179 656 CDD STKc_IRAK 353 619 - -
Mibi01g2179 656 ProSiteProfiles Gnk2-homologous domain profile. 133 239 IPR002902 -
Mibi01g2179 656 FunFam Cysteine-rich receptor-like protein kinase 10 136 239 - -
Mibi01g2179 656 ProSiteProfiles Gnk2-homologous domain profile. 25 127 IPR002902 -
Mibi01g2179 656 SMART serkin_6 347 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2179 656 Gene3D Phosphorylase Kinase; domain 1 308 422 - -
Mibi01g2179 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Mibi01g2179 656 FunFam Liguleless narrow1 423 626 - -
Mibi01g2179 656 Gene3D Transferase(Phosphotransferase) domain 1 423 630 - -
Mibi01g2179 656 SUPERFAMILY Protein kinase-like (PK-like) 329 640 IPR011009 -
Mibi01g2179 656 Pfam Salt stress response/antifungal 143 237 IPR002902 -
Mibi01g2179 656 Pfam Salt stress response/antifungal 31 124 IPR002902 -
Mibi01g2179 656 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2179 Mibi-ChrMibi01 32945329 32947927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2179 14 633 Receptor kinase-like Gene Family AT4G05200 44.018 1.47e-179 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g2179 PK_Tyr_Ser-Thr 3.5e-47 CL0016