Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2173 ATGATTGTTTTCTTCTGCATCCTCATCATCATCTTTATCACCAACCAGTCAGCCGCCTCTGTATTCAACGATGTCAACTGCAACACCAACATCACTTTCACTCCTAACGGCACCTTCCAATCCAACCTCGCCACCCTCCTCTCCTCCCTCTCCTCCAACGCCACCGACGGCACGCGATTCTACACCGCCACCGTCGGTGGGGCCCGCCACGGCGACACTAATAACAACACCGTATACGGCCTCTTCATGTGCCGTGGCGACGTGCCATATCCACTGTGCAGCGAGTGCATTAGTTTCGCCACCCAAAGGATAAGCTCATCATGCCCTTCATCAAAAGAAGCCATAATTTGGTACAACGAATGTTTACTACGATATTCCTATAGGCTTATCTTCTCTTCCATGGAAGAATGGCCTAGATATGAGATCAAGATTCCGTTAGGTGACCCTGTGCTTTTAAGAACTCGACGTTTTTATGATACGTTGGGATCTATTTTGAATGGTTTGATAGATGGAGCTGCTGAGGCACTTGGGAGATCTGATTCTAAGTATGGTGTTAAGCAAGGTGATGCTTCTGGTAACACCACGTTGTACGGCTTGGCTCAGTGTACGCCGGATTTAGCCGCCGGTGACTGTCGGCGGTGTGTGAGGGATGCGATTGAGGAGATTACGACGTCGTGTTGTGGAGGAAGCATTGGACAGAGTGTGATGTTTCCTAGCTGCTTTGTTCGCTATGAAATTTATCCTTTTTATCAGCACTCCGGAACGCCGGTGACGCTCTCGCCTGCGGCTGCTAATGGAAAAAGCAATAAATTGCAGACAGAAATCATTGCAATTATTATCCCCTCGATGATTGTTGTGGTGGCGATACTCGTTTTGTGCTACTGCATGGCACCCACAAATTCAAATTCAAAGAAGATATCACAAAAAGCCATTGATCTCTCAGAAAGCTTAGGAGTTGAAATTATTACTACAATGGATTCCTTGCAAATTGACATGGCTACAATTAAAATAGCTACGGACAACTTTTCTGAAGGAAGCAGGATTGGCAAAGGTGGATTTGGAGAAGTTTATAAGGGAGTTCTTCCCAATGGACAAGAGATAGCTGTGAAGAGATTGTCAAGAAATTCTTCTCAGGGCGTTGAAGAATTCAAAAATGAGGTTTTACTCATAGCTAAACTTCAACATAGAAATTTAGTGAGGTTACTAGGATTCTGCCTTGAAGATGATGAGAAGATACTTGTCTATGAATATGTGCCTAACAAAAGCCTTAATCACTTCCTATTTGATCCTTTGAAGCAAAGGGAATTCACTTGGGCCGAACGATTTAAGATTATAAAAGGAATTGCTCGAGGAATTCTATATTTGCATGAAGACTCTCGCCTTAAGATCATACATCGTGATCTTAAGCCAAGCAATGTTCTGTTAGATAGTAATATGAATCCAAAAATATCAGATTTTGGTATGGCAAGACTGATAACGCTAGACCAGATTGAAGGAAGCACAAATAAGATTGTTGGAACATATGGTTATATATCTCCAGAATATGCAATGCATGGATATTTTTCTATAAAATCCGATGTCTTTAGTTTCGGAGTCATGATGCTAGAGATTATCAGCGGAAGAAAGAATTCTTATTCTTATGATTCATGTCGTATTGATGATCTCCTGAGCTTCGCTTGGAGAAAATGGAGGGATGAATTAATAGAAGAATTGATGGATCCAGAAGTGAAAGAATTATATTCTCAACAGGAAGTGTTTAGGTGCATCCAGATTGGTCTATTGTGCGTTCAAGAAAATCCAGATGATAGGCCTACAATGGGAAACGTTGCTTCATACCTGAGCAACGTTACAGTTGAATTGCCATATCCTCTAGAACCTGCATTTTTCATGCAAGGTAGAAGAAGACGAAACATTGTTGAACATGGTCCCAACTCTGACCACTCCTCTAACTATTTTGCGTCCTCATCCATTAATGAGATGTCTATCAGCCAATTTTTCCCTCGCTAA 2007 0.422 MIVFFCILIIIFITNQSAASVFNDVNCNTNITFTPNGTFQSNLATLLSSLSSNATDGTRFYTATVGGARHGDTNNNTVYGLFMCRGDVPYPLCSECISFATQRISSSCPSSKEAIIWYNECLLRYSYRLIFSSMEEWPRYEIKIPLGDPVLLRTRRFYDTLGSILNGLIDGAAEALGRSDSKYGVKQGDASGNTTLYGLAQCTPDLAAGDCRRCVRDAIEEITTSCCGGSIGQSVMFPSCFVRYEIYPFYQHSGTPVTLSPAAANGKSNKLQTEIIAIIIPSMIVVVAILVLCYCMAPTNSNSKKISQKAIDLSESLGVEIITTMDSLQIDMATIKIATDNFSEGSRIGKGGFGEVYKGVLPNGQEIAVKRLSRNSSQGVEEFKNEVLLIAKLQHRNLVRLLGFCLEDDEKILVYEYVPNKSLNHFLFDPLKQREFTWAERFKIIKGIARGILYLHEDSRLKIIHRDLKPSNVLLDSNMNPKISDFGMARLITLDQIEGSTNKIVGTYGYISPEYAMHGYFSIKSDVFSFGVMMLEIISGRKNSYSYDSCRIDDLLSFAWRKWRDELIEELMDPEVKELYSQQEVFRCIQIGLLCVQENPDDRPTMGNVASYLSNVTVELPYPLEPAFFMQGRRRRNIVEHGPNSDHSSNYFASSSINEMSISQFFPR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2173 668 Gene3D Phosphorylase Kinase; domain 1 302 417 - -
Mibi01g2173 668 ProSiteProfiles Protein kinase domain profile. 342 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2173 668 Gene3D - 19 128 IPR038408 -
Mibi01g2173 668 Gene3D - 153 249 IPR038408 -
Mibi01g2173 668 SMART serkin_6 342 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2173 668 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 663 - -
Mibi01g2173 668 FunFam cysteine-rich receptor-like protein kinase 10 418 620 - -
Mibi01g2173 668 Pfam Salt stress response/antifungal 156 246 IPR002902 -
Mibi01g2173 668 Pfam Salt stress response/antifungal 27 126 IPR002902 -
Mibi01g2173 668 FunFam Cysteine-rich receptor-like protein kinase 10 301 417 - -
Mibi01g2173 668 ProSiteProfiles Gnk2-homologous domain profile. 143 249 IPR002902 -
Mibi01g2173 668 SUPERFAMILY Protein kinase-like (PK-like) 329 636 IPR011009 -
Mibi01g2173 668 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 20 129 - -
Mibi01g2173 668 ProSiteProfiles Gnk2-homologous domain profile. 21 130 IPR002902 -
Mibi01g2173 668 CDD STKc_IRAK 348 613 - -
Mibi01g2173 668 Gene3D Transferase(Phosphotransferase) domain 1 418 620 - -
Mibi01g2173 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Mibi01g2173 668 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Mibi01g2173 668 Pfam Protein kinase domain 343 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2173 Mibi-ChrMibi01 32716407 32720016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2173 3 668 Receptor kinase-like Gene Family AT4G05200 42.815 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g2173 Pkinase 1.1e-47 CL0016