Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2170 ATGGGTTGCAACATCAAAAGCCTTATACTAATTCTTTTCATGTTTCAATTGCTAATGCTTAGCGTAGCCGCTGAAAATGATAGAGATCTCTTGTTCTTATCCTGTGATGAACCTTTTAGTGATAACAAAACTAAGGATGATACATACGAAGCTAATGTAAGAACCCTCCTCTCCGATCTCGTCTCCAATTCCACCACCCAAGACAACGGATTTTTCACTTCAGTTGTTGGCTGGGGGACCCCATATTCTATCAGTGGACGAATCCTTTGCCGTGGCGACGTCACTCCCTCCACATGTCAACGCTGTGTCACTCTCGCCGCCGAAAAAGTATTAAGCTTTTGCCCCAACGTAACCCAGTCCACAATTTACTACGATCTATGCATGTTACATTATACAAGCAAGTCCTTCCAGTTTGATAGCTTACTTCCTGACGGTTCCCGTTGGTCAAATAACAAGACAGAAATCACAGATGAGAGCCGTTTCAATCAAACAGTGTGGCTTCTCTTTAGAAATGTGACTGCAGAAGCTGCGTATTCAACCTCGACCGATAAGAAATTCGCCGTTAACGAAGTTCCGGTCACGGCGACACAGAAGTTGTACGGATTAGCACAGTGCATGCCGGATTTGACGGTGTCACAATGTAGCAAGTGTTTTCAAACGGCCCTCCTGCAGCTTCTGGATTGTGATGAATATTTTAGGAAACGTGGGGAATGTTGTTGTGCGGAGAGCCCACTCGCAGGTGTTTTTTTGGCCGGATGTAACTTTAGGTATGATACACACCGTTTTTATGATGTAAGCTATAAGGCATCAAATATACCGGACGTTCATCCTACACCTCCAGGAAAACAACGGCGTACTGGATCACCAAAAATTGTATTGATTGTTGCCCCCATTATTATTTCAGCCACGCTTTTTTGTTTGAGCTATTATTTGCTGAGGAGAAAACAAAGGAAGAGCGACCAAGCTATTCTTACAAAAAACTTTGGCGAAGAAAGTTCAAAGTTACAGTCCTTGAGATTTAATCTGACTACAATTGAAGCTGCAACAAACAAGTTTTCTCACAACAATAGAATAGGCAAAGGTGGATTTGGAGATGTATACAAGGGAATTCTTCATGATGGTCAAGAAATTGCTGTGAAAAGACTCTCAAAAAATTCTGTGCAAGGAGCATCAGAATTTAAAAATGAAGTTTTGCTAATAGCTAAACTTCAACATAGAAATCTAGTGACTTTGTTGGGTTTTTGCTTGGAAGAACAAGAGAAAATTCTTGTTTATGAATATGTTCCTAATAAGAGTATTGATTTCTTCTTATTTGATATTCAAAACCAAAGACAGCTAAATTGGTTTGAACGATTCAAAATTATTGGTGGAATTGCTCGGGGGCTACTTTACTTACATGAACATTCTCGTCTCAAAGTTATTCACCGTGATCTAAAACCTAGTAATGTTTTATTAGATAGTGAGATGAATCCTAAAATATCAGATTTTGGTATGGCAAGAATGGTTGCAATAGATCAAGATCAAGAAAATACAAACAGAATTGTTGGAACATATGGATATATGTCACCAGAATATTTGATGTACGGACAATTTTCAGAGAAATCAGATGTTTTTAGCTTTGGGGTTATAATTTTAGAGATGATTAGCAGCAAAAGAAATTCTAGATCTTATGAATCACACCTCTTGACTAGTGCTTGGAGACAATGGAATGAGTTGACACCATTACATGTATTGGACTCATGTTTAATAGAATCTTGTTCTCAAACTGAAGTAACTAGGTGTTTGCAAATTGGGTTATTATGTGTTCAAGAAAATCCAGAAGAGAGGCCAACAATGGCTCAAACTGTTTCATATCTTAGTAATCCTTCCATTGAATTGCCTTCTCCAAGAGAACCCGCATTCTTCATGCATAGCAAAGAAAATTATGCAAGTGAAAATATTGCAACGAAATCTCATTTGGATCAATCTTCTGGCAATCCTAATCTATTCTCTTTGAATGAAATGTCTAAGACCGAAATCTTGCCACGATAG 2031 0.3855 MGCNIKSLILILFMFQLLMLSVAAENDRDLLFLSCDEPFSDNKTKDDTYEANVRTLLSDLVSNSTTQDNGFFTSVVGWGTPYSISGRILCRGDVTPSTCQRCVTLAAEKVLSFCPNVTQSTIYYDLCMLHYTSKSFQFDSLLPDGSRWSNNKTEITDESRFNQTVWLLFRNVTAEAAYSTSTDKKFAVNEVPVTATQKLYGLAQCMPDLTVSQCSKCFQTALLQLLDCDEYFRKRGECCCAESPLAGVFLAGCNFRYDTHRFYDVSYKASNIPDVHPTPPGKQRRTGSPKIVLIVAPIIISATLFCLSYYLLRRKQRKSDQAILTKNFGEESSKLQSLRFNLTTIEAATNKFSHNNRIGKGGFGDVYKGILHDGQEIAVKRLSKNSVQGASEFKNEVLLIAKLQHRNLVTLLGFCLEEQEKILVYEYVPNKSIDFFLFDIQNQRQLNWFERFKIIGGIARGLLYLHEHSRLKVIHRDLKPSNVLLDSEMNPKISDFGMARMVAIDQDQENTNRIVGTYGYMSPEYLMYGQFSEKSDVFSFGVIILEMISSKRNSRSYESHLLTSAWRQWNELTPLHVLDSCLIESCSQTEVTRCLQIGLLCVQENPEERPTMAQTVSYLSNPSIELPSPREPAFFMHSKENYASENIATKSHLDQSSGNPNLFSLNEMSKTEILPR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2170 676 FunFam cysteine-rich receptor-like protein kinase 10 428 626 - -
Mibi01g2170 676 ProSiteProfiles Protein kinase domain profile. 352 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2170 676 Pfam Salt stress response/antifungal 41 132 IPR002902 -
Mibi01g2170 676 Pfam Salt stress response/antifungal 153 259 IPR002902 -
Mibi01g2170 676 Pfam Protein kinase domain 354 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2170 676 CDD STKc_IRAK 358 619 - -
Mibi01g2170 676 ProSiteProfiles Gnk2-homologous domain profile. 143 262 IPR002902 -
Mibi01g2170 676 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Mibi01g2170 676 SMART serkin_6 352 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2170 676 Gene3D Transferase(Phosphotransferase) domain 1 428 626 - -
Mibi01g2170 676 Gene3D - 146 262 IPR038408 -
Mibi01g2170 676 Gene3D - 31 136 IPR038408 -
Mibi01g2170 676 Gene3D Phosphorylase Kinase; domain 1 313 427 - -
Mibi01g2170 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Mibi01g2170 676 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 313 427 - -
Mibi01g2170 676 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 40 672 - -
Mibi01g2170 676 SUPERFAMILY Protein kinase-like (PK-like) 336 648 IPR011009 -
Mibi01g2170 676 ProSiteProfiles Gnk2-homologous domain profile. 31 136 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2170 Mibi-ChrMibi01 32651410 32654288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2170 38 638 Receptor kinase-like Gene Family AT4G23230 42.695 1.24e-172 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g2170 Pkinase 9e-50 CL0016