Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2161 ATGACAAGGACTACTGTCAATATTTTTCTGGTTCTCCTTCCATTCCTTTCCCACCTTCTCATCATCACCGCCCAGAACGACGTCCCTTGGGTTAACCAAACATGTTTCGATGACAAAGGAACCTACGAAGACACAAGTGCCTATCATACCAACCTCCAAACCCTTCTCTCTAATTTCACCTCCAACACAAAAAAAGATGACTATGGCTTCTACAATTCCTCGTACGGCCAAGACCCCAACACAGTTTACGCATCTGGACTCTGCAGAGGAGATGTCAAACCAGATGCTTGCCGTAGTTGCCTCCAAAATGCCACAAGTGCTCTCCCACAGAAATGTCCAAATCAAAAGGAGGCATTTCTATACAATGACTTGTGCACTTTTCAATATTCAAATAGCTCAATGTTTGGGATATACGTGGACCCTGATTTTTTCTATGCAATTAATAACCCAGAAAATGCGGCAGATGCAAAGCAGTACTCAGATGCGCTTAATCAGCTAATGCAAGTTCTTCAAACCAACGCCGCCGGCGGTGGCCTGTACCGTAAGTTGGCGGCTGGAAACGCCTCAACGCAATTTCAAAATGTATATGGTCTTGCTCAGTGCACGCCTGATTTGACTGAGCAAGATTGTGAGGCTTGTTTGGCGAAGGCTATCTCAGATATCCCAATTTGTTGTCAGAACAAAGTTGGTGGTAGGGTTATCAAAAGGAACTGCAATCTTAGATTTGAGAAGAACCGATTCTATAATCCTACAGTTGTTGATGCAATACAGGTTCCTCTTACTCCTCCTACAGATAATAGTTCGTCGCAAGGATCTCCTGGTGCACCTAACGTCCCATCGTCCGGAGAAGGAAAAAACAATAGATCAAGAATTATCATTATCGTGGCCGTGGTGATTGGTGCCTTCATCGTCTTTCTCATATTGATTTTCATCTATTTTGCATTTTTGAGATCGAAGAAAACAATTCAAAATGAAGCTGAAACAACGGACAAGGGAGAAATTAAACCAACAAAATCGTTGCAAATTGACTTTGAAACAATTAGACTTGCTACAGATGACTTCTCTATTGCAAATAAACTTGGACAAGGAGGGTTTGGGCCAGTATATAAGGGAAAACTCCGCAGTGGACAAGAAGTTGCGGTCAAAAGGTTGTCCATGAATTCTGGACAAGGAGATTTAGAATTCAAGAATGAAGTGTTATTGATGGCCAAGCTCCAACACCGTAACTTAGTAAGGTTACTTGGTTTCTGTTTAGAAGGAATAGAAAGGCTACTCGTTTATGAATTTCTTCCCAATAGAAGCCTTGATTACGTATTATTTGATCCAATCCAGCGCACTCATTTGCATTGGGAAGTGCGTTACAAAATTATAGTGGGCATCGCTCGTGGCATTCTTTACCTTCACGAAGATTCAAGATTACGCATCATTCATCATGATCTCAAAACAAGTAATATTCTTCTTGACAAAGACTTCAGCCCAAAGATAGCAGATTTTGGCATGGCGAGATTATTTGATATTGATCAAACGCAAAGCAATACCAGCAAAATTGTTGGAACTTAG 1560 0.4141 MTRTTVNIFLVLLPFLSHLLIITAQNDVPWVNQTCFDDKGTYEDTSAYHTNLQTLLSNFTSNTKKDDYGFYNSSYGQDPNTVYASGLCRGDVKPDACRSCLQNATSALPQKCPNQKEAFLYNDLCTFQYSNSSMFGIYVDPDFFYAINNPENAADAKQYSDALNQLMQVLQTNAAGGGLYRKLAAGNASTQFQNVYGLAQCTPDLTEQDCEACLAKAISDIPICCQNKVGGRVIKRNCNLRFEKNRFYNPTVVDAIQVPLTPPTDNSSSQGSPGAPNVPSSGEGKNNRSRIIIIVAVVIGAFIVFLILIFIYFAFLRSKKTIQNEAETTDKGEIKPTKSLQIDFETIRLATDDFSIANKLGQGGFGPVYKGKLRSGQEVAVKRLSMNSGQGDLEFKNEVLLMAKLQHRNLVRLLGFCLEGIERLLVYEFLPNRSLDYVLFDPIQRTHLHWEVRYKIIVGIARGILYLHEDSRLRIIHHDLKTSNILLDKDFSPKIADFGMARLFDIDQTQSNTSKIVGT 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2161 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Mibi01g2161 519 SUPERFAMILY Protein kinase-like (PK-like) 338 519 IPR011009 -
Mibi01g2161 519 FunFam Cysteine-rich receptor-like protein kinase 10 316 429 - -
Mibi01g2161 519 Pfam Salt stress response/antifungal 35 131 IPR002902 -
Mibi01g2161 519 Pfam Salt stress response/antifungal 151 244 IPR002902 -
Mibi01g2161 519 Pfam Protein kinase domain 356 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2161 519 ProSiteProfiles Gnk2-homologous domain profile. 141 247 IPR002902 -
Mibi01g2161 519 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 519 - -
Mibi01g2161 519 MobiDBLite consensus disorder prediction 259 285 - -
Mibi01g2161 519 MobiDBLite consensus disorder prediction 260 285 - -
Mibi01g2161 519 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Mibi01g2161 519 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 430 519 - -
Mibi01g2161 519 ProSiteProfiles Protein kinase domain profile. 354 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2161 519 SMART serkin_6 354 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2161 519 Gene3D - 140 247 IPR038408 -
Mibi01g2161 519 Gene3D - 29 134 IPR038408 -
Mibi01g2161 519 Gene3D Phosphorylase Kinase; domain 1 315 429 - -
Mibi01g2161 519 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 29 134 - -
Mibi01g2161 519 Gene3D Transferase(Phosphotransferase) domain 1 430 519 - -
Mibi01g2161 519 FunFam Cysteine-rich receptor-like protein kinase 10 144 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2161 Mibi-ChrMibi01 32272488 32286955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2161 3 519 Receptor kinase-like Gene Family AT4G05200 44.952 8.87e-140 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g2161 Pkinase 6.7e-31 CL0016