Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2158 ATGTTTCCCTCACTAAACAGCAGAAATTTACTTCTGGTTTTTCTCTCAGTTTCTGTGTTCATCATTCCCCATAACTCCCAGATAACCTACCTTTATAAGGCCTGTTATCATCCACTTAGTAGCAGAGATCATGAAAAATTCAAATCCAATCTCACTGTCCTCTTGAATTCTTTGTCCTCTAAATCATCCCTTTACAGCTTTTACAAAGCTTTTTCATGTAATCTTTATGGTCTCTACCTTTGCAGGGGAGATGTTTCCATTCAAACCTGCCAAAACTGTATCAAAGCTGCAACTCAAGAAATCAAAATCAAATGTGCATATAACCAGAGTGCAATTATCTGGTATGATCAGTGCATGCTCAGATACTCTCAAGCGAGCTTCTTTGGAATGGCACAACTTAAGCCACGAGAACTCATGTGGAATCAGAAAAATAGAACTTCAGTCAATCAACCAGATGTCGATGCGCTCGCCCTGATTTACCAACTCATAAAAGAAGCCACAAATACATCTACGCTGTTCAGAGCAAACGGTTCAGAGGTGGTGACAAATAGTTCTGAGCATCGATATGGGCTTGTGCAGTGCACAAGAGACTTGAATAGTAGTTCATGCAGCTTCTGTTTGTTACAATTGATGGTAGTAGCACAGAATTTACACCAACAGAAGGCTGGTTGGCACATATTTGGTCCAAGTTGCAATATAAGACATGAAAATTATATCTTCTATCAGCAAACTTGGGGATCAGATACTGCCTCTATACCACCAATAAACCAACCAGATGATGCAGGTTCTGCAGAAGAATTGGCATCGAACGTTAGAGCAACTGTAGTTATGCTTGTACCAATTGCAATGGCTGCAGCTTTGTTGGGCTTCGCAAGCTATGTGTGTTTTCAAAGGAAAAGAAGACTCAGAGGGGGAGAAACAACTGATGAAATTCTGTTTCAAAAGTTGAAGACTTTGAAGAAGCAACACTCTAAAGAGCAAGGAACCAAGAAAGATGAGTACAACAATGAAGTTGAAAACTTTAGTTTGAAGACCATAAAGATTGCTACAAACTATTTCTCAGAAGAAGCCAAACTTGGGAAAGGAGGATTTGGGCTCGTTTTCAAGGGGAAATTGAGCAACGGCAAGGAGATAGCAGTTAAAAGGCTTTCACTCAAAACAGGGCAAGGCCTTGAAGAGTTCAAGAATGAAGTGACATTGATAGCAAAACTTCAACACAAGAATCTTGTGAGGCTTTTGGGATTCTGTCTGCAAGAAAATGAAAAGCTTCTAGTCTATGAGTACATGCCCAACACTAGCCTGGATACCTTTTTGTTTGATCCAACAAAACGTCAACAATTAGATTGGTCTAAGAGGAGGAGTATTATAATGGGAATTGCAAGAGGACTTCTGTACCTGCATGAGGACTCTAGGCTAAAAATTATCCATAGAGATCTAAAATTGAGCAATGTGTTATTAGATGGAGAGATGAATCCAAAAATTTCAGATTTTGGAACTGCTAGAATTTTCGGCAACGATCAAATTCAAGCTAGTACTGAAAGAGTTATTGGTACATATGGATATATGGCACCTGAATATGCCTTGGAGGGTTTATTTTCCATCAAGTCAGATGTTTATAGCTTCGGCGTCATCATGCTAGAAATTATCAGTGGAAAAAGAAACACTGGTTTCTACCAACCAGAACGAGGTTTAAGCCTTCTCTCCCACGCATGGCGACTCTGGAATGAAGGCAAAGGACTTGAACTTGTGGAGAGTGACTTGGTCAACACTTGCCCATCAGATAAGGATGAAGCTTTGAGATGGATCCATATTGGGCTTCTATGTGTACAAGAAAATCCACGAGATAGGCCCACCATGTCATCAGTTATTCTGATGCTAGCAAGTTCCAGCAATCTTCCTCACCCATTTGCTCCTCCATTTTCAGTCGGCAGATTCTTCGCTACTATACAGTCCTCCTCCACAACTGTTTCCACTAAACAAGTTTCATGTGATTGTTGA 1998 0.4024 MFPSLNSRNLLLVFLSVSVFIIPHNSQITYLYKACYHPLSSRDHEKFKSNLTVLLNSLSSKSSLYSFYKAFSCNLYGLYLCRGDVSIQTCQNCIKAATQEIKIKCAYNQSAIIWYDQCMLRYSQASFFGMAQLKPRELMWNQKNRTSVNQPDVDALALIYQLIKEATNTSTLFRANGSEVVTNSSEHRYGLVQCTRDLNSSSCSFCLLQLMVVAQNLHQQKAGWHIFGPSCNIRHENYIFYQQTWGSDTASIPPINQPDDAGSAEELASNVRATVVMLVPIAMAAALLGFASYVCFQRKRRLRGGETTDEILFQKLKTLKKQHSKEQGTKKDEYNNEVENFSLKTIKIATNYFSEEAKLGKGGFGLVFKGKLSNGKEIAVKRLSLKTGQGLEEFKNEVTLIAKLQHKNLVRLLGFCLQENEKLLVYEYMPNTSLDTFLFDPTKRQQLDWSKRRSIIMGIARGLLYLHEDSRLKIIHRDLKLSNVLLDGEMNPKISDFGTARIFGNDQIQASTERVIGTYGYMAPEYALEGLFSIKSDVYSFGVIMLEIISGKRNTGFYQPERGLSLLSHAWRLWNEGKGLELVESDLVNTCPSDKDEALRWIHIGLLCVQENPRDRPTMSSVILMLASSSNLPHPFAPPFSVGRFFATIQSSSTTVSTKQVSCDC 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2158 665 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Mibi01g2158 665 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 316 428 - -
Mibi01g2158 665 Gene3D Transferase(Phosphotransferase) domain 1 429 633 - -
Mibi01g2158 665 FunFam Uncharacterized protein 429 631 - -
Mibi01g2158 665 Pfam Salt stress response/antifungal 160 238 IPR002902 -
Mibi01g2158 665 Pfam Salt stress response/antifungal 42 124 IPR002902 -
Mibi01g2158 665 ProSiteProfiles Gnk2-homologous domain profile. 29 127 IPR002902 -
Mibi01g2158 665 Gene3D - 136 240 IPR038408 -
Mibi01g2158 665 Gene3D - 27 127 IPR038408 -
Mibi01g2158 665 ProSiteProfiles Protein kinase domain profile. 353 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2158 665 SUPERFAMILY Protein kinase-like (PK-like) 336 626 IPR011009 -
Mibi01g2158 665 CDD STKc_IRAK 359 626 - -
Mibi01g2158 665 ProSiteProfiles Gnk2-homologous domain profile. 133 240 IPR002902 -
Mibi01g2158 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 46 650 - -
Mibi01g2158 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Mibi01g2158 665 Pfam Protein tyrosine and serine/threonine kinase 356 624 IPR001245 GO:0004672|GO:0006468
Mibi01g2158 665 SMART serkin_6 353 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2158 665 Gene3D Phosphorylase Kinase; domain 1 314 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2158 Mibi-ChrMibi01 32208066 32211514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2158 14 635 Receptor kinase-like Gene Family AT4G05200 42.146 5.50e-169 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi01g2158 PK_Tyr_Ser-Thr 3.1e-48 CL0016