Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2104 ATGGCTTTGCAGGCTCTGAATTCTCCCACTGCTACACCAAATCCTGTTGTGTTCAAAGACGACGACCTTCACTCACTAGAGGCTTGGACAAAAGGCAAGAGATCCAAACGACCGCGTTTTGATAACAATTCACCTTCCACTGAGGAAGAATACCTAGCTATCTGCCTCCTCATGCTAGCTCACGGTGGAAACGCTAATCCCAATACGACGTTGTCGTCTTCCTCGCCGGAATCTGCTTCTCCGGCGAAGCTTCCTCACAATTGCTCTGTCTGTAACAAGTCCTTCCCGTCTTATCAGGCGCTCGGAGGACACAAGGCCAGCCACCGGAAATCGTCGTCGTCCTCCTCCGATCACCAACCTCCCGCCGACAATTCCGCCGCCACCTCCGCCGTGGCCGGCGGCGCCGGCGGGAAGCTGCATCAGTGTTCAATTTGTGGCAAGGCTTTTCCGACCGGTCAGGCACTTGGCGGCCACAAGCGCTGTCACTATGACGGAGGCGCCGGGGCCAACCACAGCGGCTCCGGTGGAGGAACGACGGTGGTGACTTCATCGGAGGGGAATACGTCGTCGGTCACTCACGGCCACCGCGGATTTGACCTGAACCTTCCGGCTCCTCTCGCCGACTACTCGCCGGCGGCGTTCGTCGTCGCCGGCGCCGGCGCCGGGAGGAGTGTGAGGATCGGAGAAGAAGAGGTCGAGAGCCCGTTACCGGTGGCGGCCGCCGCCAAGAAGCCGCGTTTGTTGGTGGACGGAGAATGA 759 0.5968 MALQALNSPTATPNPVVFKDDDLHSLEAWTKGKRSKRPRFDNNSPSTEEEYLAICLLMLAHGGNANPNTTLSSSSPESASPAKLPHNCSVCNKSFPSYQALGGHKASHRKSSSSSSDHQPPADNSAATSAVAGGAGGKLHQCSICGKAFPTGQALGGHKRCHYDGGAGANHSGSGGGTTVVTSSEGNTSSVTHGHRGFDLNLPAPLADYSPAAFVVAGAGAGRSVRIGEEEVESPLPVAAAAKKPRLLVDGE 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2104 252 MobiDBLite consensus disorder prediction 101 132 - -
Mibi01g2104 252 ProSiteProfiles Zinc finger C2H2 type domain profile. 140 162 IPR013087 -
Mibi01g2104 252 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Mibi01g2104 252 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 113 IPR013087 -
Mibi01g2104 252 MobiDBLite consensus disorder prediction 106 126 - -
Mibi01g2104 252 SUPERFAMILY beta-beta-alpha zinc fingers 85 162 IPR036236 -
Mibi01g2104 252 SMART c2h2final6 86 108 IPR013087 -
Mibi01g2104 252 SMART c2h2final6 140 162 IPR013087 -
Mibi01g2104 252 ProSitePatterns Zinc finger C2H2 type domain signature. 142 162 IPR013087 -
Mibi01g2104 252 MobiDBLite consensus disorder prediction 169 194 - -
Mibi01g2104 252 MobiDBLite consensus disorder prediction 172 194 - -
Mibi01g2104 252 Gene3D Classic Zinc Finger 84 162 - -
Mibi01g2104 252 MobiDBLite consensus disorder prediction 1 21 - -
Mibi01g2104 252 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 35 204 IPR044653 GO:0003700
Mibi01g2104 252 Pfam C2H2-type zinc finger 140 164 - -
Mibi01g2104 252 Pfam C2H2-type zinc finger 86 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2104 Mibi-ChrMibi01 30998564 30999322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2104 1 247 C2H2 Transcription Factor Family AT1G27730 46.304 7.47e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi01g2104 zf-C2H2_6 1.6e-11 CL0361