LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi01g2095	ATGCAAGTACTATTGCCTCTACGGATGTACAGAGAAGAGAATAAGTTCAAAGCTGCAAACCCTAGCTTCCCATTTCCCCAATCTCTCGTCCCCACTCGCGCTTATTCCCCACTCGCCCAATTTTTCAAAATCCCAGAGCTTCCTGATCTTTCCGCCCATTACTCTTTCACCTACAGATTGGTGGAGGTGCCTAATTGCAGCTACTTATTGAAGCTTAGAATCCAATTCAATGATTATGATCAGCGACCTATGAAGATAATTGTAGATAAGAGCCAGAGCAGTGTATATGCTGATGCGATGAGTAAAAATGTGGTTGATGCTTTGCATGAAGTGCATCAAACAGGTGGTGATCTTGTTGTTGTTAATCCTAAAAAGGATGTTCTGTTGTATGAAGGGGACAGAGATTTTGAGCCACACAAGGGCATTGAATTTGATTCTCATGAAGCAGCATATTCATTTTATCAAGAATATGCCAAATCTATGGGATTCACCACTTCTATAAAAAACAGCCGGCGTTCAAAGAAAACCAAAGAGTTTATTGATGCCAAATTCGCATGCTCTAGATACGGGTTTACTCCTGAATCAGATGGTGGGAGCAGTCGAAGGCCAAGTGTAAAGAAGACGGATTGCAAAGCCTGCATGCATGTGAAGAGAAGGTCAGATGGAAAGTGGATAATTCATGAATTCATAAAGGAGCATAATCATGAACTTCTACCAGCTCTGGCGTATCATTTTCGGATTCATAGAAATGTAAAGTTGGCTGAAAAGAATAACATTGATATATTGCATGCTGTTAGTGAACGCACCAGAAAGATGTATGTTGAAATGTCTAAGCAATCTAGTGGGTGTTATAATCTTGGGTCCCTTCTCGGTGACGTAAATTATCAGTTTGAAAGAGGCCAACATCTGGCTTTGGACGAGGGAGATGCTTGGGTAATACTTGAGTATTTTAAGCACATTCAAAAGGAGAATTCTAACTTCTTTTATGCTATTGATTTGAATGAAGAGCAACGATTGAGAAATTTGTTTTGGGTTGATGCAAAAAGTAGGAGTGATTTTGTCAGCTTTAATGATGTAGTTTCTTTTGATACTTCTTACATCAAAAGCAATGATAAGTTACCATTTGCTCCTTTTGTTGGAGTGAACCATCACTGTCAGCCCATATTGCTTGGATGTGCATTGGTTGCTGATGAGACCAAACCAACATTTGTTTGGCTGATGAAGACATGGCTTAGAGCAATGGGTGGGCAGGCTCCTAAAGTCATAATCACTGATCAAGAGAAAGCCCTGAAGGCAGCAGTTGAAGAAGTCTTCCCAAATGCACGTCACTGCTTTTCTCTTTGGCATGTACTTGATAGGATACCTGAAAATCTATCTATGGTGATAAAAAGGTATAAGAATTTCTTGCCAAAGTTTAACAAGTGCATATTTAAGTCTTGGACAGATGAAGAGTTTGACATGAGGTGGTGGAAGATGGTCACTAGATTTGAACTTCAGGATGATTTATGGTTTCGGTCTTTGTATGAAGACCGGAAAAAGTGGGTGCCTACTTATATGGGTGATACATTTTTAGCTGGAATGTCTACTGCTCAACGCTCAGAGAGTATGAACTCTTTCTTTGACAAATACATTCATAAAAAAATTACTGTTAAAGAGTTTGTGAAACAATATGGGACAATACTTCAAGATAGGTATGAAGCAGAAGCCATTGCAGATTTTGATACATCGCACAAACAGCCAGCACTCAAGTCTCCTTCTCCTTGGGAAAAGCAAATGTCAACAGTTTATACTCACGCGATCTTCAAGAAATTCCAAATTGAAGTTTTGGGTGTCGTTGGATGTCATCCTAGGAGAGAAGGTGGAGATGGAAGCATTACAAAATTTGTAGTTCAAGATTGTGAGAAGGAGCAAGAGTTTTTGGTCACTTGGAATGAGATGAACTCAGAGGTTTCTTGCTTCTGCAGATTATTTGAATATAAAGGTTTCCTTTGCAGGCATGCATTGAATGTTCTCCAACTTTGTGGATGTTCAAGTATCCCATCTCACTACATTTTAAAACGGTGGACCAAAGATGCAAAAAGTAGGGTATCATTGGTGGATGGTACTGAAAGGATCCAAAATAGGGTGCAACGTTATAACGACTTGTGTAAAAAAGCTATTGAATTGAGTGAAGAAGGATCCATATCTGAAGAGAGTTATGATATTGTTTTCCGTGCCATTGTTGATGCCCTGAAGAATTGTGTACATGTGAACAATTCTAACAACAATAATGCAGAAACCAGCAACAATTCTCTTGCCCTACGTGAAGCAGGAGAAAATCAGGTTAACATTGTTACAAAATCAACTAAAAAGAGGACACCAGCCAAGAGAAGAAAGGTACAAGTAGATACAGATATGATACTTGTCGATGCACAAGACAGCCTGCAGCAAATGGATAACCTTGGCTCGGATGGAATGACCCTTAATGGTTATTATGGTGCCCAGCAAAATGTGCAAGGACTGGTACAGTTGAACTTAATGGAGCCTCCTCATGATGGTTACTATGTTAATCAACAGAGTATGCAAGGCCTTGGACAATTGAATTCTATGACCTCGAGCCATGACGGATTTTTTGGGACACAGCAAAGCATTCATGGACTGGGGCCATTGGAGTTTCGTCCACCGACCACTTTTGGATATACACTGCAGGATGAGCCTGATCTGAGGTCTTCCCAGTTTCATGGCAGCAGTTCAAGAAATACATAG	2745	0.4007	MQVLLPLRMYREENKFKAANPSFPFPQSLVPTRAYSPLAQFFKIPELPDLSAHYSFTYRLVEVPNCSYLLKLRIQFNDYDQRPMKIIVDKSQSSVYADAMSKNVVDALHEVHQTGGDLVVVNPKKDVLLYEGDRDFEPHKGIEFDSHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGFTPESDGGSSRRPSVKKTDCKACMHVKRRSDGKWIIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSKQSSGCYNLGSLLGDVNYQFERGQHLALDEGDAWVILEYFKHIQKENSNFFYAIDLNEEQRLRNLFWVDAKSRSDFVSFNDVVSFDTSYIKSNDKLPFAPFVGVNHHCQPILLGCALVADETKPTFVWLMKTWLRAMGGQAPKVIITDQEKALKAAVEEVFPNARHCFSLWHVLDRIPENLSMVIKRYKNFLPKFNKCIFKSWTDEEFDMRWWKMVTRFELQDDLWFRSLYEDRKKWVPTYMGDTFLAGMSTAQRSESMNSFFDKYIHKKITVKEFVKQYGTILQDRYEAEAIADFDTSHKQPALKSPSPWEKQMSTVYTHAIFKKFQIEVLGVVGCHPRREGGDGSITKFVVQDCEKEQEFLVTWNEMNSEVSCFCRLFEYKGFLCRHALNVLQLCGCSSIPSHYILKRWTKDAKSRVSLVDGTERIQNRVQRYNDLCKKAIELSEEGSISEESYDIVFRAIVDALKNCVHVNNSNNNNAETSNNSLALREAGENQVNIVTKSTKKRTPAKRRKVQVDTDMILVDAQDSLQQMDNLGSDGMTLNGYYGAQQNVQGLVQLNLMEPPHDGYYVNQQSMQGLGQLNSMTSSHDGFFGTQQSIHGLGPLEFRPPTTFGYTLQDEPDLRSSQFHGSSSRNT	914

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi01g2095	914	Pfam	SWIM zinc finger	648	674	IPR007527	GO:0008270
	Mibi01g2095	914	SMART	26again6	650	677	IPR006564	GO:0008270
	Mibi01g2095	914	Pfam	MULE transposase domain	359	451	IPR018289	-
	Mibi01g2095	914	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	132	748	IPR031052	GO:0006355
	Mibi01g2095	914	ProSiteProfiles	Zinc finger SWIM-type profile.	639	675	IPR007527	GO:0008270
	Mibi01g2095	914	Pfam	FAR1 DNA-binding domain	152	239	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi01g2095	Mibi-ChrMibi01	30852767	30858770	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Mibi01g2095		MULE	4.1e-24	CL0219