Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2051 ATGGAGTCCTCTCACGTAGATGTCGATCGCGTTAAGGGTCCATGGAGCCCTGAAGAGGACGAATTATTGAAACAGCACGTGCAACGTCACGGCGCTCGTAATTGGTCGTCAATAAGCAAGTCGATTCCAGGAAGATCTGGAAAATCTTGCCGTCTTCGGTGGTGTAACCAGCTCTCACCGGACGTAGAACGTGGTTCCTTCACTCCTGAGGAAGATGAGATCATAGTGAAGGCACACGCTACGTTTGGCAACAAATGGGCCACCATAGCTAAATTTCTCAACGGCCGTACGGATAACTCCGTTAAGAATCACTGGAACTCCACGTTGAAGAGGAAGTACTCGTTGTTGGTTGGGAACGTTGGAGAAGTTCCGTCTGTTTTAACGGCGAAGAAGCCGGCCATCGGAGATCGAACGGTGACGATTTCACCGGCGTTAATGGCGAGGAATTGTTACAGTCCGAGCAGCCAAACTGGATCTGACGTGAGCGATTCGAACTGTTTGGCTCTGATTCGGGATGAATCGAGACCGTTGGATGCGATTCGGAATTCTGATCTGTCAACGGAACTGACTCTGTCTCTTCCTGGAGCAGAGCATGATGGAAAGGAATTAACGGAATCGATGACGGCGTTATTGACGGAGGAGAAGCGGAGTGGAATTGCGACGTTTGGGCCAGAGTTACTGGCAGTTATGAAGGAGATGATAAGGGATGAAGTGAGAAATTATATGGAGGCATTGTGA 738 0.4946 MESSHVDVDRVKGPWSPEEDELLKQHVQRHGARNWSSISKSIPGRSGKSCRLRWCNQLSPDVERGSFTPEEDEIIVKAHATFGNKWATIAKFLNGRTDNSVKNHWNSTLKRKYSLLVGNVGEVPSVLTAKKPAIGDRTVTISPALMARNCYSPSSQTGSDVSDSNCLALIRDESRPLDAIRNSDLSTELTLSLPGAEHDGKELTESMTALLTEEKRSGIATFGPELLAVMKEMIRDEVRNYMEAL 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2051 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 113 IPR017930 -
Mibi01g2051 245 Gene3D - 66 112 - -
Mibi01g2051 245 PANTHER MYB PROTEIN-RELATED 12 163 - -
Mibi01g2051 245 SMART sant 63 111 IPR001005 -
Mibi01g2051 245 SMART sant 11 60 IPR001005 -
Mibi01g2051 245 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Mibi01g2051 245 CDD SANT 14 56 IPR001005 -
Mibi01g2051 245 FunFam MYB transcription factor 12 63 - -
Mibi01g2051 245 Pfam Myb-like DNA-binding domain 15 73 - -
Mibi01g2051 245 Gene3D - 11 63 - -
Mibi01g2051 245 CDD SANT 66 109 IPR001005 -
Mibi01g2051 245 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Mibi01g2051 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 62 IPR017930 -
Mibi01g2051 245 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2051 Mibi-ChrMibi01 30025172 30025909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2051 7 245 MYB Transcription Factor Family AT4G37260 45.756 4.11e-66 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g2051 Myb_DNA-bind_6 4.2e-18 CL0123