Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2049 ATGAATCTTTACTCTAAGAACCTCCATCGTTTCTGGTGTAAAGTTTCGATCTTTCTTTTTCTTCTCCTTCTTCCTTCCCCCTCTGCTCTTAACACTGATGGGGTTTCTTTGCTTTCTTTCAAATACTCCATCCTCAGCGACCCATTATCAGTTTTAGAGAGCTGGAACTACAACGACGTGAACCCATGTTCTTGGAATGGAGTTACCTGCGACGAAATCGAAAACCCAGGTACTCTGTTGAGAGTCACTTCCTTGGTTCTTCCTAACAGCCAGCTTCTGGGTTCCATTTCAGAAGAACTAGGAAACATCACATACCTTCGACGTCTCGATTTGTCCACAAATCTCCTCAATGGCTCTTTACCCAGTTCCATTTTCAACTCTTCCGAGCTTCGTGTTCTCTCTCTCTCCAACAATGTCATCTCCGGTGAGCTGTCTGAGTTGATCGGCCAGCTGAAAAATCTTCAAGTTCTTAACCTCTCTGATAATGCTTTTGCTGGGGCTTTTGCAGTAAGAAGGATTGGAGAATGTGGGATTGCGAAAAGGAAGGATTTTGAGAATCATATGAAGATTATTTCTAAGATTCGCCATCCCAATTTGGTTAAGGTTCGTGGGTTTTGCTGGGGAGAAGATGAGAAGCTCGTGATCTGTGATTATGTTCCCAATGGCAGCCTAGCTAGCAGCTTCAGCCACAGAAGAGCAGCGTGTTCTTCTCCATTGAACTGGCCATTGGAAGTGAGGTTAAAGATAGCAAAAGGAATCGCAAGAGGCTTAGCTTTCATTCACGAAAAGAAACATGTTCATGGCAACATCAAACCCAGCAACATCTTATTAAGCTCAGAAATGGAGCCTATAATAAGCGATTTTGGGCTCGACCGTCTGAGGCCAACCGGTTCAATGGTGAACCGGGGAAGCCAACCGGACCTCCATCATGTGGGTTCATCAAGTGGAGCCCACCAAATGTTGCCATATCAAGCACCAGAGTTTCTTCAAAACGATCAAATCCAACCCAAGCCCAAGTGGGATGTGTACTCGTTTGGGATATTGTTGTTGGAGCTTCTGAGTGGGAGGGTTTTCTTGGACCGGGAGTTAGACCGGTGGGTCAAAGAATGCGGTTCAGAGGAAGAGGAAAAAGACCGGGTTTTGAGGATGGTTGATGTGGGCATCAAGAGCGAGGTGGAAAGGAAGGAAGAAGATATATTGGTGTGCTTCAAGTTAGGGTTTCGTTGTGCCTCTCTTAAGCCTCAAAAGAGACCATCCATGAAAGAGGCTTTACAAATCCTAGAGAAAATCCCTAATTAA 1299 0.4503 MNLYSKNLHRFWCKVSIFLFLLLLPSPSALNTDGVSLLSFKYSILSDPLSVLESWNYNDVNPCSWNGVTCDEIENPGTLLRVTSLVLPNSQLLGSISEELGNITYLRRLDLSTNLLNGSLPSSIFNSSELRVLSLSNNVISGELSELIGQLKNLQVLNLSDNAFAGAFAVRRIGECGIAKRKDFENHMKIISKIRHPNLVKVRGFCWGEDEKLVICDYVPNGSLASSFSHRRAACSSPLNWPLEVRLKIAKGIARGLAFIHEKKHVHGNIKPSNILLSSEMEPIISDFGLDRLRPTGSMVNRGSQPDLHHVGSSSGAHQMLPYQAPEFLQNDQIQPKPKWDVYSFGILLLELLSGRVFLDRELDRWVKECGSEEEEKDRVLRMVDVGIKSEVERKEEDILVCFKLGFRCASLKPQKRPSMKEALQILEKIPN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2049 432 Pfam Leucine Rich repeats (2 copies) 129 162 IPR025875 -
Mibi01g2049 432 SUPERFAMILY Protein kinase-like (PK-like) 168 429 IPR011009 -
Mibi01g2049 432 FunFam Leucine-rich repeat receptor-like kinase 34 147 - -
Mibi01g2049 432 SUPERFAMILY L domain-like 33 168 - -
Mibi01g2049 432 Gene3D Transferase(Phosphotransferase) domain 1 220 432 - -
Mibi01g2049 432 Gene3D Ribonuclease Inhibitor 29 170 IPR032675 -
Mibi01g2049 432 ProSiteProfiles Protein kinase domain profile. 142 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2049 432 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Mibi01g2049 432 Pfam Protein kinase domain 147 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2049 432 Gene3D Phosphorylase Kinase; domain 1 171 219 - -
Mibi01g2049 432 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 166 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2049 Mibi-ChrMibi01 29999849 30002503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2049 167 431 Receptor kinase-like Gene Family AT5G67280 49.640 1.07e-81 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi01g2049 Pkinase 2.9e-29 CL0016