Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2043 ATGGATTCGGTTACTGCTGATACGGCTAATTTGCCTCCTACTAAAGATCCATCTACTTCACCTTCTGTTAAAGATCACGAAGGACAAACTTCTCCCCCTGCTGTCTCTGGACAAGAAAATTCTTCACATGTGACATCCCCTACGCAATCTTCCACTGGCATTTCGTCATGGGCTAGAAATTTGAAAATTCCCCAGCCATTTTCTGGCTCTCAAGATGATTCAGCAAGTGAAAATTCTGGGAAATCTACTTTTGCACGCTTCACTAATAATTTAGCAATGAGGTTGTCTCCCAAACCATCGTCGTCAGATGAAAGTTCCAATGAAGCTGCTGCTCAATCCAATTTGATTGAAAGTTTCGCAAAGGGTCTGGTTGACTCTTCTAGAAATGCTGTGAAAGCTGTGCAGGTCAAGGCCCGACATGTTGTTTCTCAGAATAAACGCCGATACCAGGAGGGAGGATTTGATCTAGATATGACATACATCACGGAAAACATTATAGCTATGGGATTTCCTGCTGGTGACATGAGCTCTGGGTTCTTCGGTTATGTGGAAGGGCTTTACAGAAATCATATGGAAGAAGTGATCAAGTTTTTTGAGACCCATCATAAGGGTAAATATAAAGTATACAATCTTTGTTCTGAGCGGCTGTACGATGCATCATTATTTGAGGGGAAGGTGGCTTGTTTCCCATTTGATGACCATAATTGCCCACCAATGCAACTGATTATATCATTTTGTCAAAGTGCTTACGCATGGTTGAAGCAAGACATTGAGAATGTTGTGGTTGTCCACTGTAAAGCTGGAATGGCGAGGACAGGGTTGATGATTTCCAGTCTTCTATTATTCTTGAAGTTCTTCCCAACTGCTGAGGAGTCCATTGATTACTACAATCAGAAAAGGTGTTTTGATGGAAAAGGACTTGTTCTGCCAAGTCAGATTAGGTATGTCAAATATTTTGAACGTGTCTTGACTTACTTTAATGGCGAAAACCCTCCTGCCCGCAGATGCATGCTTAGGGGATTCCGACTTCACAGGTGCCCTTACTGGATCAGGCCTTCTATAACCGTCTCAGATCATAGTGGTGTCTTGTTCTCAACTAAAAAGCATCCAAGAACCAAGGATCTTAATCCAGAAGATATTTGGTTCACTGCACCAAAGAAAGGAGTGATGGTCTTTGCCATGCCTGGTGAACCTGGTCTTACAGAGGTAGCTGGGGACTTCAAAATTCATTTTCATGATCGGCAAGGAGATTTTTACTGTTGGTTGAACACAACTATGACTGAAAACAGGAAAATATTGAACACCAGTGATCTTGATGGTTTTGACAAGAGAAAATTACCTTCACCTGGATTCCTGGTTGAGGTTGTGCTTGTGGATTATAATGGCAATGTCACGACATCCGCACCTGAAACTGTTACCAATAGAACGGATGAGAGGCCAAGTAGTATTTCAACCCCAGTTGATGCAAGCACCACAGCTCCAAAAGCTGAAAAGGAGTCCGAGAATCACGATAAAGAGGATGATGTGTTTTCAGACGGCGAGTCTGAGGATTCTACTTCAAAAAGCAGGCAGGCAAAAGCAGCTTCTGAAGCAGTTACTAATCCTAATCCTACCACTGGATCTGAATCTAAAACTTCAAGTGAGATGACAAGTGTAACGCATGCCACGGAGCAAATATCTTTAGGACCTACAAGTGTTAGTCCAATTCCCAGTGGTAGTAAGCCAAAAGGTGAAGATGCACGAACAGTGTCCAGTGTGGAAGCTCCCAGCTCAGAAAGTGAATTTAAGGCAATGGCCGCAGATGCTTCTGTGTTTACGTTTGGGGATGATGAAGACTATGAAAGCGAGTGA 1851 0.4284 MDSVTADTANLPPTKDPSTSPSVKDHEGQTSPPAVSGQENSSHVTSPTQSSTGISSWARNLKIPQPFSGSQDDSASENSGKSTFARFTNNLAMRLSPKPSSSDESSNEAAAQSNLIESFAKGLVDSSRNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGLYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPMQLIISFCQSAYAWLKQDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIDYYNQKRCFDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRCMLRGFRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLNPEDIWFTAPKKGVMVFAMPGEPGLTEVAGDFKIHFHDRQGDFYCWLNTTMTENRKILNTSDLDGFDKRKLPSPGFLVEVVLVDYNGNVTTSAPETVTNRTDERPSSISTPVDASTTAPKAEKESENHDKEDDVFSDGESEDSTSKSRQAKAASEAVTNPNPTTGSESKTSSEMTSVTHATEQISLGPTSVSPIPSGSKPKGEDARTVSSVEAPSSESEFKAMAADASVFTFGDDEDYESE 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2043 616 ProSiteProfiles C2 tensin-type domain profile. 333 460 IPR014020 -
Mibi01g2043 616 Gene3D Protein tyrosine phosphatase superfamily 132 329 IPR029021 -
Mibi01g2043 616 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 132 329 - -
Mibi01g2043 616 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 124 565 - -
Mibi01g2043 616 MobiDBLite consensus disorder prediction 465 616 - -
Mibi01g2043 616 MobiDBLite consensus disorder prediction 524 571 - -
Mibi01g2043 616 ProSiteProfiles Phosphatase tensin-type domain profile. 147 326 IPR029023 -
Mibi01g2043 616 MobiDBLite consensus disorder prediction 1 81 - -
Mibi01g2043 616 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 261 300 IPR000387 GO:0016311|GO:0016791
Mibi01g2043 616 SMART PTEN_C2_2 331 459 IPR014020 -
Mibi01g2043 616 MobiDBLite consensus disorder prediction 494 523 - -
Mibi01g2043 616 MobiDBLite consensus disorder prediction 465 491 - -
Mibi01g2043 616 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 328 IPR029021 -
Mibi01g2043 616 ProSitePatterns Tyrosine specific protein phosphatases active site. 263 273 IPR016130 GO:0016311|GO:0016791
Mibi01g2043 616 CDD PTP_PTEN 157 321 IPR045101 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2043 Mibi-ChrMibi01 29926230 29930654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2043 4 616 Protein tyrosine phosphatase (PTP) family AT3G19420 64.952 0.0 830