Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2013 ATGTCTGCAGATAGAGAACAACAGAGGGAGGAGAATTTTTCTGGTGCTTATGACCCTTCTTCAGCCACAACAAGAGGGAAGAAGAAGATTGTTAATAATAGTACTAATAATGGTAAAATTATAGATAATGCTGAGAGGGAAAGGCGCAAGAAAATCAGATCTTTGTTTTCTAGCCTTCAGGCTATGCTCCCTCATGTTCCCCCTCAGGCAGACAAAGTAACAGTAGTAGATGAAACAATAAACTACATAAGAATATTGGAGAAAACTTTGAAAAACCTTGAAAAGAAGAAGATGGATAGACTTCGATCGTCTGTCTCTTATGTTGGCAATCCCGGTGGTGCTTCAAGAGAGGCCTTCATAGCTGAAAAAGTAGTTTCTTCCTCATCCCCCACAAATTCTTCAAGTCCAAATAATAATAATAACAACAACCCAGAAGAAGTAATGTTCGAAACTTGGTCTTCTCCAAATGTGGTGGTCAACATTGGTGGTGACGAAGCTCAATTCAGTGTTTGCTCTTCCAAGAATAATAGCCTCTTCACCAATATATGCTGTGTTCTCGACAAGTATAGGATTGAAGTTTTGTCTGCCCACATTTCATGTGACAATGGTCGCAGGTTCTGGATGTTCCAAGCAAAAGTGAACGGCAATTCGGATGGGGAATTATCAGCAGAGGAAATATTCAAGCAAGCTGCTGCTGATATTATTCAGTGTGTCTCTTGA 720 0.4 MSADREQQREENFSGAYDPSSATTRGKKKIVNNSTNNGKIIDNAERERRKKIRSLFSSLQAMLPHVPPQADKVTVVDETINYIRILEKTLKNLEKKKMDRLRSSVSYVGNPGGASREAFIAEKVVSSSSPTNSSSPNNNNNNNPEEVMFETWSSPNVVVNIGGDEAQFSVCSSKNNSLFTNICCVLDKYRIEVLSAHISCDNGRRFWMFQAKVNGNSDGELSAEEIFKQAAADIIQCVS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2013 239 Pfam Helix-loop-helix DNA-binding domain 44 86 IPR011598 GO:0046983
Mibi01g2013 239 CDD bHLH_AtbHLH_like 44 94 IPR045239 -
Mibi01g2013 239 Gene3D - 42 107 IPR036638 GO:0046983
Mibi01g2013 239 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 18 236 IPR044278 GO:0003700|GO:0006355|GO:0009960
Mibi01g2013 239 Coils Coil 76 96 - -
Mibi01g2013 239 MobiDBLite consensus disorder prediction 1 37 - -
Mibi01g2013 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 44 97 IPR036638 GO:0046983
Mibi01g2013 239 MobiDBLite consensus disorder prediction 125 147 - -
Mibi01g2013 239 MobiDBLite consensus disorder prediction 13 37 - -
Mibi01g2013 239 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 36 86 IPR011598 GO:0046983
Mibi01g2013 239 SMART finulus 42 92 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2013 Mibi-ChrMibi01 29435490 29437240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2013 20 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 32.950 2.55e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g2013 HLH 1.3e-07 No_clan