Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2012 ATGCCTTCCTCCTCTGATCTCTCAAGCTCAGAAATCACTGTGGAGAAATCCCTGAGAGGCAACAAGAGAGATCTCAGCTCGGTTGACAGTCGTCGTCGTCAATCTCATACCTCTGCAGAGAGAGAACGAAGGAAGAAGATGAGGCTCCACCTCTCAGAACTGCAAGAGTTGGTCCCTTCTGTTCAAAATACTAGGGCAGACAAGGTAACCATTGTTGAAGAAACTATCAAGTACATTAAGACCCTTGAAGCCCGTGTTGAAAAGATGCAGAAGTTAAAGAGGGAGAGACTTCCCCACTTTGTTCCACAAAACCCAGCAGGGTTTAATAAGACTTGGGTTTTCCCAAATGTGGCTGTGAACATTAATGGGGAAAAAGCTTTGTTTACAGTATGCTTTCCCAATAACAAGCAAGACCTCTACAAAGAAATCTCTTATGCTCTTCACAAGTATAATATTCAGATTTCGTGGGTCAGCATTTCAACTGATAAGTATAAAATCTTGTATAAGCTTCAAGCAAGTGCAAACGGGAAGAACAATTCGGATGGAAGTTCATATGAGGCATTGGAGGAAACATTCAAGAAAGCGGCAAGAGAACTTTATCTTCTCTGTCCTATGTGA 618 0.4223 MPSSSDLSSSEITVEKSLRGNKRDLSSVDSRRRQSHTSAERERRKKMRLHLSELQELVPSVQNTRADKVTIVEETIKYIKTLEARVEKMQKLKRERLPHFVPQNPAGFNKTWVFPNVAVNINGEKALFTVCFPNNKQDLYKEISYALHKYNIQISWVSISTDKYKILYKLQASANGKNNSDGSSYEALEETFKKAARELYLLCPM 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2012 205 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 31 82 IPR011598 GO:0046983
Mibi01g2012 205 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 20 201 IPR044278 GO:0003700|GO:0006355|GO:0009960
Mibi01g2012 205 Coils Coil 72 92 - -
Mibi01g2012 205 MobiDBLite consensus disorder prediction 1 44 - -
Mibi01g2012 205 CDD bHLH_AtbHLH_like 36 90 IPR045239 -
Mibi01g2012 205 Gene3D - 22 97 IPR036638 GO:0046983
Mibi01g2012 205 MobiDBLite consensus disorder prediction 16 44 - -
Mibi01g2012 205 Pfam Helix-loop-helix DNA-binding domain 32 83 IPR011598 GO:0046983
Mibi01g2012 205 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 30 102 IPR036638 GO:0046983
Mibi01g2012 205 SMART finulus 37 88 IPR011598 GO:0046983
Mibi01g2012 205 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2012 Mibi-ChrMibi01 29422546 29423368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2012 1 97 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 37.255 1.60e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g2012 HLH 2.9e-13 No_clan