Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2011 ATGTCTGTACAAAGAGAACGAGAGAGTAAAAACCAGTCCAGTTATTCTCACAAATTCAGGAAGGGCCTAACCCTAACCCTACCTGGTGATGATGATGATGAACTGTATTATAATTCTCATGCTGCTTCAGCCACAACAATAGTGAAGAAGGAGAAGGGTGTTGCTAACAGTGCTAATGATGAAATAATGGATACTACTGAGAAGGAGAGGCGCAAGAAAATCAGATCTTTGTTTGGTGACCTTCATGCTATGCTCCCTCATGTTCCCCCTCAGGCAGACAAAGTGACAATAGTGGATGAAACAATGAACTACATAAAAACATTGGAGGGTACTTTGACAAACCTGGAAAAGAAGAGGATGGAAAGATTTAAAGCTGCAAAAGAACAGCAAGCTGCTGCCTCCTCATCCACTTCAATTGGACGTAATAACCGTAATAATGAGCCAGAAGAAGTAAAGTACCAAACTTGGACTTCTTCAAATGTGGTTGTCAGCATTACTGGCCAAGAAGCTAACTTCAGTGTTTGCTCTACCAAGAGTCGCGGCGTGTTGACCACTATCTGCTGTGTTTTCGAGAAGTACAAGATTGAGGTTTTGTCTGCCCACATTTCATGTGACAGTAATAATCGCAGGTTCTATATGTTACAAGCTCTAGTGAACAAAGATTCGGCTCAGCTTCCTGCGGCAATGTTATCAGCGGAGGATATATTCAGGCAAGCTGCTGAAGAAATTATTCAGAGTGTCTATTGA 747 0.419 MSVQRERESKNQSSYSHKFRKGLTLTLPGDDDDELYYNSHAASATTIVKKEKGVANSANDEIMDTTEKERRKKIRSLFGDLHAMLPHVPPQADKVTIVDETMNYIKTLEGTLTNLEKKRMERFKAAKEQQAAASSSTSIGRNNRNNEPEEVKYQTWTSSNVVVSITGQEANFSVCSTKSRGVLTTICCVFEKYKIEVLSAHISCDSNNRRFYMLQALVNKDSAQLPAAMLSAEDIFRQAAEEIIQSVY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2011 248 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 8 244 IPR044278 GO:0003700|GO:0006355|GO:0009960
Mibi01g2011 248 Coils Coil 98 118 - -
Mibi01g2011 248 Pfam Helix-loop-helix DNA-binding domain 66 109 IPR011598 GO:0046983
Mibi01g2011 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 58 108 IPR011598 GO:0046983
Mibi01g2011 248 MobiDBLite consensus disorder prediction 1 23 - -
Mibi01g2011 248 MobiDBLite consensus disorder prediction 129 150 - -
Mibi01g2011 248 SMART finulus 66 114 IPR011598 GO:0046983
Mibi01g2011 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 66 118 IPR036638 GO:0046983
Mibi01g2011 248 MobiDBLite consensus disorder prediction 1 15 - -
Mibi01g2011 248 CDD bHLH_AtbHLH_like 66 116 IPR045239 -
Mibi01g2011 248 MobiDBLite consensus disorder prediction 124 150 - -
Mibi01g2011 248 Gene3D - 63 133 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2011 Mibi-ChrMibi01 29418699 29420046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2011 57 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 30.672 2.93e-22 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g2011 HLH 3e-07 No_clan