Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2010 ATGGCTCAAATGGTTTGTGGTTCTTGTCGTCGCCTTCTTTCATATCCACAAGGTGCCAAGCATGTTAAGTGTTCTTGCTGTCAGACAGTAAACCTTGTGTTAGAAGCTGAGCAGGTTGGGCAAGTCAACTGTGGGAGCTGCGCAGTTCTGTTAATGTACCCGTATGGTGCTCCACAAGTTAGGTGTTGCTCTTGCCAGTTTGTGACGAAAATTGAGGAACACAACAAGCGGCCTCCATGGTCTGTATTGCAAGGGAAACCTACTCCTCCTAAATCAGTTTCTTAG 285 0.4667 MAQMVCGSCRRLLSYPQGAKHVKCSCCQTVNLVLEAEQVGQVNCGSCAVLLMYPYGAPQVRCCSCQFVTKIEEHNKRPPWSVLQGKPTPPKSVS 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2010 94 PANTHER PROTEIN LSD1 1 90 IPR040319 -
Mibi01g2010 94 Pfam LSD1 zinc finger 44 68 IPR005735 -
Mibi01g2010 94 Pfam LSD1 zinc finger 6 30 IPR005735 -
Mibi01g2010 94 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 3 33 IPR005735 -
Mibi01g2010 94 TIGRFAM LSD1: zinc finger domain, LSD1 subclass 41 70 IPR005735 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Mibi01g2010 zf-LSD1 4.8e-12 No_clan