Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g2006 ATGCTCCGTGGGATTGCATTTTTCTTGTTTGGGCTTTTGGCAGTCTTTGGAGTTCAGCTTCCTGCAATAATGGCTGATTGCCCTTTGGATTTAAGTACTTCAAACTTTACAATGGCATCCTCTGTCTGCTCAGACCAAAGCGACAGGAATAGCTGTTGTCGCTACATTAATGCTAACATTGCCATTTCCGTTGCTCGTTATGCGAATGGAACAGCCAACCTTGGAGTCCCTCCAGATGCTACTGTCTTCTGCCTCCAGACCATAACTGAGACCTTGCAACTTTATGGAGTCACGCCAAATGCAGCTGTTTTCTGTGGATTTGGGACAAAAATCCCGGTTAATTACGAGTGTAAAGGTCGAACTACTGTCACACAGATGCTGCAATCTCCCAGATTTGGGGAAGTCACTGAAAATTGCAAAGTGCCTCTTGTCAAGGAAGCTGATTGCAAGAAATGTTTGAATTCTGCCATTGGTTACCTACATAATGTAATTGGTGTACAAGATAATATCACATTAAGTACATGCCGTGATGCCACTTTTACTGCATTGGCAAGTCAAGTAGATGATATGTCTACTGTTGAAATTGCGAGCTGTTTCTTTGGGGTTCAAGGACTTCTCGGGCCTACTGGTATGAATGCTTCAGAGCCATCCACTTCACCAACTCCTAAGACTTCTCCAAGTCCTCCGGCTGCTGATAGCCCAAATCCATTGCTGTTAGGTGCACCACTTAAAAGTAATCACCATAGATACCACTTGACATTAATTCCAGGTATTGGTATTGCCGTCACAGCTGTTGCGGTTACGATGCTCATAGTCTTTATCGTTTTAATTCGTCAAAAAAGCAGAGAGCTAGAGGGGCCTGATCATTTAAGTAAATCCTCCTCAAAATCCTTACCCCCTTGTGCTACGTGGAGATACCAGGATGGTCCTTCATCTACATTTCGAAAATTTAAATATAGCGAGATAAAGAAGGCCACGGATGATTTTAGCACTATCATCGGACAAGGAGGATTTGGAACTGTGTATAAAGCTCATTTTAGTGATGGCTTAGTGACAGCAGTAAAGCGTATGGATAAAGCATCAGAGCAAAAGGGGGATGAGTTCTGTAGAGAAATAGAGCTCGTTGCTCGGCTTCATCACCGCCATCTAGTTGCATTAAGAGGATTTTGCATTAAAAAGCATGAGAGGTTTCTGATGTACGAGTACATGGAAAATGGAAGCTTGAAAGATCATCTTCATTCCCCTGGGAAAACACCTCTAAGTTGGCGAACAAGAATCCAAATTGCTATTGACGTGGCTAATGCACTGGAGTACCTTCATTTCTATTGTGATCCTCCTCTCTGCCACAGAGACATCAAGTCTAGCAACATCTTACTGGATGGGAAATTCGTTGCAAAGCTAGCTGATTTTGGACTGGCACATGCTTCAAAAGATGGTTCTATATTCTTTGAACCAGTGAATACTGATATTCGGGGAACTCCAGGTTATATGGATCCGGAATATATTGTTACTCAAGAACTCACCGAGAAAAGCGATATTTACAGTTTTGGTGTGGTATTATTAGAGATTGTAACAGGAAGGCGAGCTATTCAAGATAATAAGAATTTGGTCGAATGGGCACAACCATTCATGGAATTTGAATCAAGATTGATGGAATTAGTGGATCCCAATGTGAGGGAATCCTTTGATTTGGATCAGCTCCAAACAGTTGTCTCTATAGTAGGATGGTGCACTCAAAGAGAAAGCAGGGCAAGGCCTTCAATAAAACAGGTCCGTAGACTTCTGTATGAGACCTCAGAACCAATCCACAGCGGATTTTTACAAGCTGTTGAAGATGAAGAATATAGAGAAAATCAGCAATCTGGAAGAAGAAGCAAGGGAAAATTACACAGAAACGAACCAAATTATCACAGTGGGGATGGAAGATGTCTAGCTTCTTCTTCTAGTACAACCAGGTCATATTGCAGTAGAAGTTTCTTACTTGAGACAGGATCTCCACAGTCCCCTCAAAATATTTTTTCAGTTTAA 2028 0.4191 MLRGIAFFLFGLLAVFGVQLPAIMADCPLDLSTSNFTMASSVCSDQSDRNSCCRYINANIAISVARYANGTANLGVPPDATVFCLQTITETLQLYGVTPNAAVFCGFGTKIPVNYECKGRTTVTQMLQSPRFGEVTENCKVPLVKEADCKKCLNSAIGYLHNVIGVQDNITLSTCRDATFTALASQVDDMSTVEIASCFFGVQGLLGPTGMNASEPSTSPTPKTSPSPPAADSPNPLLLGAPLKSNHHRYHLTLIPGIGIAVTAVAVTMLIVFIVLIRQKSRELEGPDHLSKSSSKSLPPCATWRYQDGPSSTFRKFKYSEIKKATDDFSTIIGQGGFGTVYKAHFSDGLVTAVKRMDKASEQKGDEFCREIELVARLHHRHLVALRGFCIKKHERFLMYEYMENGSLKDHLHSPGKTPLSWRTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDGKFVAKLADFGLAHASKDGSIFFEPVNTDIRGTPGYMDPEYIVTQELTEKSDIYSFGVVLLEIVTGRRAIQDNKNLVEWAQPFMEFESRLMELVDPNVRESFDLDQLQTVVSIVGWCTQRESRARPSIKQVRRLLYETSEPIHSGFLQAVEDEEYRENQQSGRRSKGKLHRNEPNYHSGDGRCLASSSSTTRSYCSRSFLLETGSPQSPQNIFSV 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g2006 675 Pfam SPARK 25 162 IPR043891 -
Mibi01g2006 675 SUPERFAMILY Protein kinase-like (PK-like) 308 597 IPR011009 -
Mibi01g2006 675 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Mibi01g2006 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Mibi01g2006 675 FunFam Putative receptor-like protein kinase 403 603 - -
Mibi01g2006 675 SMART serkin_6 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2006 675 MobiDBLite consensus disorder prediction 613 637 - -
Mibi01g2006 675 MobiDBLite consensus disorder prediction 613 648 - -
Mibi01g2006 675 Gene3D Transferase(Phosphotransferase) domain 1 403 618 - -
Mibi01g2006 675 CDD STKc_IRAK 333 595 - -
Mibi01g2006 675 ProSiteProfiles Protein kinase domain profile. 327 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2006 675 PANTHER OS01G0750732 PROTEIN 162 616 - -
Mibi01g2006 675 Pfam Protein kinase domain 331 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g2006 675 MobiDBLite consensus disorder prediction 221 235 - -
Mibi01g2006 675 Gene3D Phosphorylase Kinase; domain 1 305 402 - -
Mibi01g2006 675 MobiDBLite consensus disorder prediction 210 238 - -
Mibi01g2006 675 FunFam Putative receptor-like protein kinase 295 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g2006 Mibi-ChrMibi01 29305368 29309205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g2006 25 674 Receptor kinase-like Gene Family AT3G19300 60.276 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Mibi01g2006 Pkinase 6.4e-50 CL0016