Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1994 ATGTCTTCCTCCCACCGAACCATATTCGCCGGAGCTCCGATTACCACCTCCTCCACCCAACCGCCGCCGCCGCCGCCGCCGAATTTCTTCTACAACGACCAAGAACACTCCGTCATCGTCGAAGCCCTCACCAATGTCGTCGTCGGCTCCACCTCCACCGCCACCGCCTCCGGCGACCTCGTCGAACAAATCCGATTCCCTCCGGCGGCCTTCGACTACTCCGACGCCGTCTCCGCCGCCACGTCGGCCCCAATCGGATTCGTTCCAACCGTCGAGACCTGCGGGGAATGCAAGATTGAAGGATGCTTGGGCTGCAAGTTTTTCCGTCCGGCGGAGGAGAATAATAAGAAGAAGAAAAGTGGCGGGAAAAAGAAGACGGTTACAACGACGTCGTATAACAAGAAGAAGAAATACAGGGGAGTTAGACAGAGGCCTTGGGGTAAATGGGCCGCTGAGATCCGAGACCCGAGAAGGGCGACCCGGGTTTGGTTGGGTACTTTTAATACCGCTGAGGAAGCCGCACGCGCTTACGATAATGCAGCCATTGAATTTCGCGGCCCACGTGCGAAACTCAATTTCCCTTTTCCCGATAACTCGTTGAGTGACTCGCATTCCCAAACAGAGCATGTGGAAGTGGAAAGATCGGAGTGTGCGTTGGAGCAAGCAGAGAATTCGAATCCTGGGAATTATTATGATGAGGATGTTTGGAGGATGGGGATTGGGAATGGGAAGGGAAATGAATTCTTTGATGGAATTGGGGATCCGGAGTTTCAGCAGTGGATGACTATGATGATGGATTTTGGAGGAGATTCGTCCGACTCTGCTACTACTAATAGCCAGAGTCCTCATAGTTGGTGA 858 0.5361 MSSSHRTIFAGAPITTSSTQPPPPPPPNFFYNDQEHSVIVEALTNVVVGSTSTATASGDLVEQIRFPPAAFDYSDAVSAATSAPIGFVPTVETCGECKIEGCLGCKFFRPAEENNKKKKSGGKKKTVTTTSYNKKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDNAAIEFRGPRAKLNFPFPDNSLSDSHSQTEHVEVERSECALEQAENSNPGNYYDEDVWRMGIGNGKGNEFFDGIGDPEFQQWMTMMMDFGGDSSDSATTNSQSPHSW 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1994 285 ProSiteProfiles AP2/ERF domain profile. 137 194 IPR001471 GO:0003700|GO:0006355
Mibi01g1994 285 CDD AP2 136 194 IPR001471 GO:0003700|GO:0006355
Mibi01g1994 285 SUPERFAMILY DNA-binding domain 137 195 IPR016177 GO:0003677
Mibi01g1994 285 FunFam Ethylene-responsive transcription factor 2 136 195 - -
Mibi01g1994 285 Pfam AP2 domain 137 186 IPR001471 GO:0003700|GO:0006355
Mibi01g1994 285 MobiDBLite consensus disorder prediction 1 16 - -
Mibi01g1994 285 Gene3D AP2/ERF domain 136 195 IPR036955 GO:0003700|GO:0006355
Mibi01g1994 285 PANTHER DNA-BINDING DOMAIN 117 218 IPR044808 GO:0003700|GO:0009873
Mibi01g1994 285 PRINTS Ethylene responsive element binding protein signature 160 176 IPR001471 GO:0003700|GO:0006355
Mibi01g1994 285 PRINTS Ethylene responsive element binding protein signature 138 149 IPR001471 GO:0003700|GO:0006355
Mibi01g1994 285 SMART rav1_2 137 200 IPR001471 GO:0003700|GO:0006355
Mibi01g1994 285 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1994 Mibi-ChrMibi01 29145452 29146309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1994 4 203 AP2-EREBP Transcription Factor Family AT4G34410 43.182 9.90e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi01g1994 AP2 5.7e-16 CL0081