Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1985 ATGGATGACTATTTGAGCAGCGATGACGATTATCATTACTCCGATCAGGGTTCCGTCGAAGGCTTCGAAAACGACGAGCCCGATGTTCAGTTGGTCACTCATAAGGGCCCCACAACTCTGGTGATTACAAGGGAATCGCTTCTAGCTGCCCAGAAAGAAGATTTGCGCCGAGTAATGGAAATGCTGTCATTAAGAGAGCACCATGCACGTACTCTCCTTATCCATCATCGTTGGGATGTGGAGAATTTGTTTGCAGTGTATGTAGACAAGGGAAAAGCTGCCTTGTTTGCTGAAGCTGGTGTTAGTGTGGATGAACAGTGTGATCCTGACCCATCAGTTCCTTCTACAGTCACGTGTGAAATTTGCATGGAAGATGTTCCCAGTCATGAAGCGACAAAAATGGATTGTGGGCACTGTTTTTGCAACAGTTGTTGGACATCACACTTTATTGTCAAGATAAATGAGGGTCAAAGTAGACGTATAAGGTGCATGGCACACAAATGTAATGCCATTTGTGATGAAGCTGTTGTGAGAAATCTAGTCAGTAAAGAGAACCCTGATATGGCAGAGAAATTTGACCGTTTTCTTCTTGAGTCATACATTGAAGACAATAAAAGGGTTAAATGGTGTCCCAGCATTCCTCATTGTGGGAATGCAATTCGTGTTGAGGATGACGAATTATGTGAGGTAGAATGTTCATGTGGTTTACAGTTCTGTTTTAGCTGCTTGTCAGAAACGCATTCCCCATGTTCCTGTTTGATGTGGGAGCTCTGGGCTAAGAAGTGTCGAGATGAATCAGAAACTGTTAATTGGATAGCAGTTCATACAAAGCCTTGTCCAAAATGCCACAAACCAGTGGAGAAGAATGGCGGTTGCAACTTGGTTAGCTGTATCTGTGGTCAAGCATTTTGTTGGCTTTGTGGTGGAGCTACTGGGCGAGAGCATACGTGGTCAAGTATAGCTGGTCATAGCTGTGGTCGTTATAAACAGCTAGAAAAAACAGCTGAACGGGCTAAGCGAGATCTATATCGATACATGCATTATCATAATCGCTATAAAGCTCACACAGACTCCTTTAAACTTGAAAGTAAATTGAAAGAGACTATACAAGGCAAGGTTGCTATTTCAGAGGAGAGGGATTCTACGCTCAGGGATTATAGTTGGGTGAATAATGGACTTTCTAGACTTTTCAGATCTAGACGTGTCCTATCATATTCATATCCATTTGCATTTTATATGTTTGGAGATGAGCTATTTAAGGATGAAATGTCAGAAGAGCAAAGGGAAATAAAACAACACTTGTTTGAGGATCAGCAGCAACAACTCGAGGCTAATGTTGAAAAGCTTTCCAAAATTCTGGAGGAACCGTTCGACCAGTTTACAGATGATAAAGTTATGGAGATAAGGATTCAAGTCATTAATCTATCAGCCATTATTGACAATCTGTGCCAGAAAATGTATGAGTGCATTGAGAATGATTTATTAGGTTCTCTACAATTGGGCATTCACAGTATTGCTCCATACAAGTCAAAGGGCATAGAGAGGGCATCAGAACTTTCAACTTGTTGGAACTATAAAGGCGATAATGCTGTTAAAACAGAAGAACTTGATCGGCCCTCTGGGTCTGGATGTTCAGATGACAGTGGATGTCCTTCTCACAAGCGTGCTAGGAAAGAAGGTGCTGGTGGTGTCCTTTTTGATCTAAACTTGCCAGCGGAGGTTGTAGACAGAAATTGA 1737 0.4203 MDDYLSSDDDYHYSDQGSVEGFENDEPDVQLVTHKGPTTLVITRESLLAAQKEDLRRVMEMLSLREHHARTLLIHHRWDVENLFAVYVDKGKAALFAEAGVSVDEQCDPDPSVPSTVTCEICMEDVPSHEATKMDCGHCFCNSCWTSHFIVKINEGQSRRIRCMAHKCNAICDEAVVRNLVSKENPDMAEKFDRFLLESYIEDNKRVKWCPSIPHCGNAIRVEDDELCEVECSCGLQFCFSCLSETHSPCSCLMWELWAKKCRDESETVNWIAVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTWSSIAGHSCGRYKQLEKTAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKETIQGKVAISEERDSTLRDYSWVNNGLSRLFRSRRVLSYSYPFAFYMFGDELFKDEMSEEQREIKQHLFEDQQQQLEANVEKLSKILEEPFDQFTDDKVMEIRIQVINLSAIIDNLCQKMYECIENDLLGSLQLGIHSIAPYKSKGIERASELSTCWNYKGDNAVKTEELDRPSGSGCSDDSGCPSHKRARKEGAGGVLFDLNLPAEVVDRN 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1985 578 Pfam Ariadne domain 331 578 IPR045840 -
Mibi01g1985 578 MobiDBLite consensus disorder prediction 534 557 - -
Mibi01g1985 578 ProSiteProfiles Zinc finger RING-type profile. 119 167 IPR001841 -
Mibi01g1985 578 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 204 IPR013083 -
Mibi01g1985 578 Gene3D - 248 495 - -
Mibi01g1985 578 FunFam RBR-type E3 ubiquitin transferase 114 204 - -
Mibi01g1985 578 Pfam IBR domain, a half RING-finger domain 190 252 IPR002867 -
Mibi01g1985 578 SMART ibrneu5 190 252 IPR002867 -
Mibi01g1985 578 SMART ibrneu5 260 325 IPR002867 -
Mibi01g1985 578 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 51 402 IPR031127 GO:0004842|GO:0016567
Mibi01g1985 578 SUPERFAMILY RING/U-box 190 258 - -
Mibi01g1985 578 SUPERFAMILY RING/U-box 260 317 - -
Mibi01g1985 578 FunFam RBR-type E3 ubiquitin transferase 248 495 - -
Mibi01g1985 578 SUPERFAMILY RING/U-box 115 202 - -
Mibi01g1985 578 MobiDBLite consensus disorder prediction 1 26 - -
Mibi01g1985 578 ProSiteProfiles TRIAD supradomain profile. 115 329 IPR044066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1985 Mibi-ChrMibi01 29067998 29072266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1985 59 526 ARIADNE family AT2G16090 75.847 0.0 753