Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1959 ATGCCGCGTCCTTGTTTTCACAAGCTCGTTCTTCCATCCACCCTCCAAGCCGGCCTACTGAGGATTCCAGATTATTTTTTGAGGAGGTTTGGTGGGGAGCTGTCTACAATTGCTACCCTCAGTGTTCCTGATGGTAGTGTCTGGCATATTTGTTTAAAAAAGGCAGACAACAAATTTTGGCTCAATGATGGTTGGAAGGAGTTTGTTCAACGTTACTCCATAGGCGTTGGATGCTTTTTGGTGTTCAGATATGAAGGGAATTCATCTTTTAATGTTCATATTTTCAATTTGGCTGCTTCTGAGATAAACTATCGATTAGGCAATCGAAATAATGAACAGCCTTACTTTTCCAACCAACATATTTTTGAAGACATGGAAGATGAGGATTCCATGGAATACTCGGATTCGGCACCTTCACATTTAACCCCTGGTGCATTTAGTAACAAGGTTATAGCTGGATCTGCAGATCAATTGACACCTGGGAAGAATTATACTCCTTCACGATTGCAGAATTTGTTTAATGGGTCTAAACTTAATAGTATAAACTGGGGAGACACCATTTCTTCGAAGGGTGCGAATTCAGGAACCAATCAATTGACCAGAGATAAAGGTGTTCAGTTCAACGCAGCTGAGTTTAAAAGATCTACTGAAGAGTTGAAATTGCGTGCATCCAATAATGAAATGCAGAGAGTTAAAAAAACTGTAAGAAAAAGGCGGAAAACTGATCCTAATGAAGAATCCTCTCCTCAACATGAAGAGGAGGTAGAAATGCGTTTTAGATTTTATGAAAGTGCTTCTGCAAGAAAAAGAACTGTGACAGCAGAAGAAAGAGAAAGGGTAGTTAATGCTTCAAAAGCATATGAACCACCTAATCCTTTCTGTAGGGTCGTTCTGCGGCCATCCTATCTGTATAGAGGATGCATAATGTATTTGCCATCATGCTTTGCAGAAAAGCATCTGAATGGGGTTTCAGGTTTCATCAAACTCCAGATTAGTGAGGGAAGACAGTGGCCAGTTCGCTGCCTTTATAGAGGCGGTAGAGCAAAGTTAAGCCAGGGGTGGTTCGAATTTGCCCAGGATAATAATCTTGGGGAAGGTGATGTATGTGTTTTTGAGCTGCTCAGAATGAGGGAAGTAGTGCTGAAAGTTACTATATTCCAAGTCCTTGAAGAAGATGTGGGGTTGTTGAGCCCTCCCATGCAGCAAAGCCAAACCATGAGCCCAACCTCAAAGATGTTGAACAGTCACTTGCGGCAGCGAGATATGAGCCCCATTAAAATGATTAGAAATTAG 1293 0.4153 MPRPCFHKLVLPSTLQAGLLRIPDYFLRRFGGELSTIATLSVPDGSVWHICLKKADNKFWLNDGWKEFVQRYSIGVGCFLVFRYEGNSSFNVHIFNLAASEINYRLGNRNNEQPYFSNQHIFEDMEDEDSMEYSDSAPSHLTPGAFSNKVIAGSADQLTPGKNYTPSRLQNLFNGSKLNSINWGDTISSKGANSGTNQLTRDKGVQFNAAEFKRSTEELKLRASNNEMQRVKKTVRKRRKTDPNEESSPQHEEEVEMRFRFYESASARKRTVTAEERERVVNASKAYEPPNPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQISEGRQWPVRCLYRGGRAKLSQGWFEFAQDNNLGEGDVCVFELLRMREVVLKVTIFQVLEEDVGLLSPPMQQSQTMSPTSKMLNSHLRQRDMSPIKMIRN 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1959 430 Pfam B3 DNA binding domain 7 96 IPR003340 GO:0003677
Mibi01g1959 430 Pfam B3 DNA binding domain 297 386 IPR003340 GO:0003677
Mibi01g1959 430 ProSiteProfiles B3 DNA-binding domain profile. 294 389 IPR003340 GO:0003677
Mibi01g1959 430 SMART B3_2 6 98 IPR003340 GO:0003677
Mibi01g1959 430 SMART B3_2 294 389 IPR003340 GO:0003677
Mibi01g1959 430 MobiDBLite consensus disorder prediction 225 254 - -
Mibi01g1959 430 Gene3D - 1 98 IPR015300 -
Mibi01g1959 430 CDD B3_DNA 292 386 IPR003340 GO:0003677
Mibi01g1959 430 MobiDBLite consensus disorder prediction 238 254 - -
Mibi01g1959 430 PANTHER B3 DOMAIN-CONTAINING 3 377 - -
Mibi01g1959 430 SUPERFAMILY DNA-binding pseudobarrel domain 3 96 IPR015300 -
Mibi01g1959 430 Gene3D - 271 390 IPR015300 -
Mibi01g1959 430 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Mibi01g1959 430 SUPERFAMILY DNA-binding pseudobarrel domain 287 387 IPR015300 -
Mibi01g1959 430 CDD B3_DNA 4 96 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1959 Mibi-ChrMibi01 28769029 28772562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1959 1 394 B3 DNA Binding Superfamily AT3G18990 50.000 3.35e-128 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi01g1959 B3 2.2e-17 CL0405