Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1956 ATGGCTATGCCATACACAAATCACAATAAAGCCTTAGGCTGCTTCATCTTTAGCTCCCTCTTTATATCTTCTCTTTCACATTTTCTTCCCTCAATCTCAGGGGATATCGAATTTTCATTAGGTTTCGGTTTTGAATTTGATTTCAACTTAACTTTTGAACATGAAAGGCATAAAAACGCCTATATTGCCCTTCAATCATGGAAAAATGCCATCTACTCTGATCCATTGAACACACTTGAAAATTGGGTTGGTTCTGATGTCTGTTCTTATAATGGTGTGTTCTGTACTGAAGCTCTTGATGACCCCACATTAAATGTTGTTGCCGGAATTGATCTTAACCATGCAGATATTGCCGGTCGTCTTGTTCCTGAGCTAGGCCTCTTAACTGACATGGCCCTGTTCCATATTAACTCCAATAGGTTTTGTGGGATTATCCCAGACAGCTTTAAGAATCTCACTCTTATGTTTGAGTTTGATATTAGCAACAATAGGTTTGTTGGTGGTTTCCCTTCTGTTGTCCTTACATGGCCAAATGTAAAGTACTTGGATCTTAGGTTTAATGATTTTGAAGGTGCTCTGCCTCCAGAACTATTTGAGAAAGATATTGATGCGTTGTTCTTGAACGATAATCGCTTTGATTCAACCATCCCAGAAACACTTGGAAATTCTTCAGTCTCTGTTGTGACATTTGCTAACAACAAATTCACAGGTTGTATTCCTAAATCAATTGGGAATTTGGTGAACTTGAATGAGATTGTTTTCTTGGGGAATGGTCTTGGTGGTTGTTTCCCTAGAGAGATTGGATTGTTGGGGAATGTGACTGTTTTTGATGGAAGCCATAATGGGTTTGTTGGGACTCTGCCAAATTTGTCTGGTTTGAAGAATGTGGAGGTCATAGATATTGCACACAACAAGATTTCTGGGTATGTGTCTGACAATGTTTGCAAGCTACCAAGTTTGACCAAATTCTCATTCTCGGATAATTACTTCAATGGAGAAGCTCAATCTTGCTTGAATTCTTCTTCAAGAGCAAATGTTGTTTTTGATGATAGTGATAATTGTTTGCCATTAAGGTCAAATCAAAAGACTAGCAAGCAATGTTTGCCAGTGGTGACTCGTCACGTTGATTGTAGTATGAGATGTGCAAGTGGCAGCGGCGGCAACCATACTCCGCCGGTTCATTCTTCTCCACCCACCGTCAAATCTCCTCCTCCGCCGGTTTTCTCACCTCCACCACCTGCTCACTCCCCACCTCCGCCACCGGTTCACTCTCCTCCTCCACCGGTTCATTCCCCACCTCCTCCACCACCGGTTCATTCCCCACCTCCTCCACCGGTTCAGTCTCCTCCACCACCTGTTCATTCCCCACCTCCTCCACCGGTTCATTCCCCACTTCCTCCACCGGTTTACTCTCCTCCACCACCGGTTCACTCCCCTCCCCCACCTCAAGTTCACTCTCCTCCTCCACCGGTTCACTCTTCACCACCACCACCGGTTCACTATCCACCGCCTCCACCTGTGCTCTCTCCGCCGCCGCCGGCTCACTCCCCTCCTCCTCTGCCAGTCCACTCTCCGCCGCCACCTGTTTTCTCTCCTCCTCCTCCGGTATTGTCTCCACCAACACGGGTATGGGATGATGTCATCTTGCCTCCAATCTTCGGAGCCCACTATAGTTCGCCGCCTCCACCAGCTATTGTTGGGTATTAA 1707 0.4575 MAMPYTNHNKALGCFIFSSLFISSLSHFLPSISGDIEFSLGFGFEFDFNLTFEHERHKNAYIALQSWKNAIYSDPLNTLENWVGSDVCSYNGVFCTEALDDPTLNVVAGIDLNHADIAGRLVPELGLLTDMALFHINSNRFCGIIPDSFKNLTLMFEFDISNNRFVGGFPSVVLTWPNVKYLDLRFNDFEGALPPELFEKDIDALFLNDNRFDSTIPETLGNSSVSVVTFANNKFTGCIPKSIGNLVNLNEIVFLGNGLGGCFPREIGLLGNVTVFDGSHNGFVGTLPNLSGLKNVEVIDIAHNKISGYVSDNVCKLPSLTKFSFSDNYFNGEAQSCLNSSSRANVVFDDSDNCLPLRSNQKTSKQCLPVVTRHVDCSMRCASGSGGNHTPPVHSSPPTVKSPPPPVFSPPPPAHSPPPPPVHSPPPPVHSPPPPPPVHSPPPPPVQSPPPPVHSPPPPPVHSPLPPPVYSPPPPVHSPPPPQVHSPPPPVHSSPPPPVHYPPPPPVLSPPPPAHSPPPLPVHSPPPPVFSPPPPVLSPPTRVWDDVILPPIFGAHYSSPPPPAIVGY 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1956 568 SUPERFAMILY L domain-like 60 341 - -
Mibi01g1956 568 PRINTS Proline rich extensin signature 440 461 - -
Mibi01g1956 568 PRINTS Proline rich extensin signature 405 421 - -
Mibi01g1956 568 PRINTS Proline rich extensin signature 390 402 - -
Mibi01g1956 568 PRINTS Proline rich extensin signature 425 437 - -
Mibi01g1956 568 FunFam Leucine-rich repeat extensin-like protein 1 61 222 - -
Mibi01g1956 568 Pfam Leucine rich repeat N-terminal domain 61 95 IPR013210 -
Mibi01g1956 568 Gene3D Ribonuclease Inhibitor 59 354 IPR032675 -
Mibi01g1956 568 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 26 563 - -
Mibi01g1956 568 MobiDBLite consensus disorder prediction 396 540 - -
Mibi01g1956 568 MobiDBLite consensus disorder prediction 383 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1956 Mibi-ChrMibi01 28746111 28747817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1956 3 381 Trihelix Transcription Factor Family AT1G49490 61.282 3.62e-167 495