Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1946 ATGGGTTCGCTTCCTCCTGAGCTGACCTTGGATTTGAGACCCACTTTTGTTCCTAGGACGATCAGTGATTTCCTCTACGAGGTTTCCACCATCGGAAACGCCGCCGACAAGTTATCCAGGTTTGATGAGTTTCTCGTCAGATTGGAAGACGAAATGAGGAAGATCGACGCCTTCAAGCGTGAGCTTCCTCTCTGTATGCTCCTCTTAAATGATGCAATCTTGAGTCTGAAGGAGGAATCATCGAAACTCAGGACACCTATTTCTCAGCCTGTGCTGGAAGAATTTATTCCCTTGACGAAGAAGGAATGTGATCAGAAAAAGGATGATGAGAAAGAAAAGGAATGTAGAGATAAGAAGAATTGGATGAGTTCTGTTCAGCTATGGAATGCAGATAATCATCTCAGTACTGACATTGCTTATGATCAAAGGCAACACTATGAATTAGAAACCAAGAAATGCGAAGAGGAAGGACAATCTGTGCCTGAGGATCCATTCCAACCTCGTAGAAACAGTGATAATGGATGCAGGGCGTTCTTGCCTTTTACAACCTATTCTAGCATCCCTGCTATGCCAGTGATAGCTAAGGAAGAAAAGGAAGATTCCATTAATGGTCTCTCTCTTCTGACTCCTGGTACTAAAGTTTTGAGGGAAGGTTCTGGTTCAAGTGGATCAAGAAGTAGCTCTAGCAGAGCAGTTTCTTCATCCACCCCCAGTTTGCAGCCAATTATACCCACAGGTCACCAGCAGCCAGAAAAGCAAGTTGCCCGGAAACAGAGGAGGTGCTGGTCCCCGGAGCTACACCGACGATTTGTCAATGCATTACAGCAACTCGGAGGTTCTCTAGCGGCAACCCCAAAACAAATCAGAGAACTCATGCAGGTTGATGGTCTGACCAATGATGAAGTGAAAAGTCATTTACAAAAATACCGACTTCACACTCGAAGAACACCGGCTACCACAGCCGCGGCTGCTAATCAGTCTGTAGTTCTTGGGGGAATGTGGATGTCCCAAGATCAGCACAATGAATCCTCCAAGGCTAGCAGTTCTGGCTCAGGTTCTCCTCAAGGCCCCCTCCAGTTAGCAGCATCCGGTGGAGGGATGGAAGATGATGAAGATGAAAAATCCGAGTGCCTTAGCTGGAAAAGTCACATTCACAAATCTGGAAAAGATGTATAG 1176 0.46 MGSLPPELTLDLRPTFVPRTISDFLYEVSTIGNAADKLSRFDEFLVRLEDEMRKIDAFKRELPLCMLLLNDAILSLKEESSKLRTPISQPVLEEFIPLTKKECDQKKDDEKEKECRDKKNWMSSVQLWNADNHLSTDIAYDQRQHYELETKKCEEEGQSVPEDPFQPRRNSDNGCRAFLPFTTYSSIPAMPVIAKEEKEDSINGLSLLTPGTKVLREGSGSSGSRSSSSRAVSSSTPSLQPIIPTGHQQPEKQVARKQRRCWSPELHRRFVNALQQLGGSLAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRTPATTAAAANQSVVLGGMWMSQDQHNESSKASSSGSGSPQGPLQLAASGGGMEDDEDEKSECLSWKSHIHKSGKDV 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1946 391 MobiDBLite consensus disorder prediction 338 391 - -
Mibi01g1946 391 FunFam Myb family transcription factor 256 314 - -
Mibi01g1946 391 Pfam Myb-like DNA-binding domain 259 310 IPR001005 -
Mibi01g1946 391 Gene3D - 256 314 - -
Mibi01g1946 391 SUPERFAMILY Homeodomain-like 255 315 IPR009057 -
Mibi01g1946 391 MobiDBLite consensus disorder prediction 212 253 - -
Mibi01g1946 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 256 314 IPR017930 -
Mibi01g1946 391 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 13 381 IPR044787 GO:0003700|GO:0006355
Mibi01g1946 391 MobiDBLite consensus disorder prediction 338 358 - -
Mibi01g1946 391 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 257 312 IPR006447 GO:0003677
Mibi01g1946 391 MobiDBLite consensus disorder prediction 215 247 - -
Mibi01g1946 391 MobiDBLite consensus disorder prediction 152 172 - -
Mibi01g1946 391 MobiDBLite consensus disorder prediction 374 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1946 Mibi-ChrMibi01 28579674 28581620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1946 7 335 G2-like Transcription Factor Family AT2G03500 38.551 4.90e-57 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi01g1946 Myb_DNA-binding 8.1e-07 CL0123