Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1944 ATGCATACATATGAGAATGATAATGTGAAGTGTTTGTTGTTGGAATTAAGTAGACAATCTCAAGCCATGGCTTCTTCTAACTATAATTCTATTATCTCTGTCTTGATCTTGTTATGTATTTGTGTGTGCCCTCTTAGGGTTCATATGTTTCCTAATGGTTATTATAATTATCCTCCTCAAGCATTTGATGGAGGTGGTGGAAGAATAGAGAAGCAACTGAATTACAACTTCTATGACACAACATGCCCTAATCTTCTCTTCATTGTTCGTTCTGGTGTCCTGTCTGCCATCAACAACGACCCCCGAATGGCTGCTTCCCTCCTTCGTCTTCACTTCCATGACTGTATTGTCAACGGATGCGATGGGTCGGTACTATTGGATGACACAAAGCAAATGAGAGGAGAAAAGAACGCAGGACCCAACAAGAATTCGGCGAGAGGGTTTGAAGTAATTGAGGCAATCAAAGCTGGCGTGGAATCATACTGTCCCTCCACTGTCTCCTGCGCTGACATTCTTGCCCTCGCTGCCCGTGAATCTGTCCTTCAGGCTGGAGGGCCATTTTGGGAGGTTGGATTGGGAAGAAGAGATTCAATCACAGCAAGTATGGACGCAGCCAATCAACAGATCCCTATACCTTTCGAGTCCCTCCAAAACATCACCGCCAAGTTCACTTCCAAAGGTCTCGACTTGAGGGACGTCGTTGTCCTCTCAGGAGGGCATACGATTGGGTTTGCACAGTGTTTTACGTTCAAAGGGAGACTATTCAACTTCAACGGGTCGGGCAAACCCGATCCAACCATTGATCCGCTGCTTCTCTCGGGTCTACAGAGAACGTGTCCAAACAGGAACTCATCCGATGCAAAACTAGCTCCTCTCGATGCTGCCTCCTCCTTCAGATTTGACAATGCTTATTACACCAACCTGGTTAAGAACTCGGGTCTTCTTCAATCCGACCAGATTCTTAACGCTGATCCCACCACCGTTGACTTGGTCAACTACTATAGTACCAACCAGTTCGCCTTCTTCAATGACTTTGCTACCTCCATGGCTAAGCTCAGTAGTGTTGGTGTTCTTACTGGCCAGAATGGCCAGGTTAGACTCAAGTGTGGCTCTGTTAATCCACACTAA 1128 0.461 MHTYENDNVKCLLLELSRQSQAMASSNYNSIISVLILLCICVCPLRVHMFPNGYYNYPPQAFDGGGGRIEKQLNYNFYDTTCPNLLFIVRSGVLSAINNDPRMAASLLRLHFHDCIVNGCDGSVLLDDTKQMRGEKNAGPNKNSARGFEVIEAIKAGVESYCPSTVSCADILALAARESVLQAGGPFWEVGLGRRDSITASMDAANQQIPIPFESLQNITAKFTSKGLDLRDVVVLSGGHTIGFAQCFTFKGRLFNFNGSGKPDPTIDPLLLSGLQRTCPNRNSSDAKLAPLDAASSFRFDNAYYTNLVKNSGLLQSDQILNADPTTVDLVNYYSTNQFAFFNDFATSMAKLSSVGVLTGQNGQVRLKCGSVNPH 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1944 375 SUPERFAMILY Heme-dependent peroxidases 72 374 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 FunFam Peroxidase 76 222 - -
Mibi01g1944 375 ProSitePatterns Peroxidases active site signature. 104 115 IPR019794 GO:0004601
Mibi01g1944 375 ProSitePatterns Peroxidases proximal heme-ligand signature. 232 242 IPR019793 -
Mibi01g1944 375 CDD secretory_peroxidase 72 372 IPR033905 GO:0004601|GO:0042744
Mibi01g1944 375 PRINTS Plant peroxidase signature 146 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 PRINTS Plant peroxidase signature 231 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 PRINTS Plant peroxidase signature 291 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 PRINTS Plant peroxidase signature 106 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 PRINTS Plant peroxidase signature 307 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 PRINTS Plant peroxidase signature 347 360 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 PRINTS Plant peroxidase signature 82 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 PRINTS Plant peroxidase signature 184 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 PRINTS Plant peroxidase signature 165 175 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 Gene3D - 76 373 - -
Mibi01g1944 375 PANTHER PEROXIDASE 72-RELATED 70 371 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 Gene3D Peroxidase, domain 2 210 352 - -
Mibi01g1944 375 PRINTS Haem peroxidase superfamily signature 184 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 PRINTS Haem peroxidase superfamily signature 166 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 PRINTS Haem peroxidase superfamily signature 232 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 PRINTS Haem peroxidase superfamily signature 293 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 PRINTS Haem peroxidase superfamily signature 104 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 FunFam Peroxidase 210 352 - -
Mibi01g1944 375 Pfam Peroxidase 92 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi01g1944 375 ProSiteProfiles Plant heme peroxidase family profile. 72 373 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1944 Mibi-ChrMibi01 28556362 28561103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1944 47 370 Peroxidase AT1G49570 62.385 9.60e-144 410