Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1922 ATGGTGGTTTCTAAGTTAACATACGAGGAATGCAGGCGACAACGGCTAGAAGAAAACAAGAAGAGAATGGAGGAACTCAACCTCAACAAGCTTGCTAGTGCCTTAAAACCTTTACCATCACCAAATAAAAAGCCTTCCCCTGGAAAGCCTAGGGTGCCACGTAAGCCAGTGAGTCCTTCTTCGGCTCCAGTAAGAAGGTCTGGTCGCGTAGCCAAATTACCTTCTCCAAACTACAAGGAAGTCCCTATTGAACCTTTGTTGAGACCAAGAAGGTCATATCAGAAAAGGGATTTGTTAAATCGAGTTTATGCTTCAGATGAAGTTAGGCAATATGCAATCGAAAGAGCTGAAGAAATTCTCTCTGGTTTAGATTCTAAATATCCAAGTTTTATTAAGCCTATGCTCCAATCTCATGTCACTGGAGGATTTTGGCTAGGCCTTCCAGTTCAGTTCTGCAAAACTCATCTTCCTCAGAATGATGAAACAATTACTCTAATAGATGAGGATGGGAATGAGTCTCCTACCAAATACCTTGCTGATAAAACAGGTCTTAGTGGTGGTTGGCGAGGTTTCTCAATTGATCATGAACTAGTTGATGGGGATGCTTTGGTGTTTCAACTAATCAAACCCACAAAATTTAAGGTGTTCATAATTCGAGCATATGAGTCGGAAAACAAAGAGGAAGAAGATGAAAATTTGGATGCTTCCCACTTGAACCGGAGCTCCAAAAGAGCTAGAGCAAGTAACTCCCTTTAA 756 0.414 MVVSKLTYEECRRQRLEENKKRMEELNLNKLASALKPLPSPNKKPSPGKPRVPRKPVSPSSAPVRRSGRVAKLPSPNYKEVPIEPLLRPRRSYQKRDLLNRVYASDEVRQYAIERAEEILSGLDSKYPSFIKPMLQSHVTGGFWLGLPVQFCKTHLPQNDETITLIDEDGNESPTKYLADKTGLSGGWRGFSIDHELVDGDALVFQLIKPTKFKVFIIRAYESENKEEEDENLDASHLNRSSKRARASNSL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1922 251 Pfam B3 DNA binding domain 130 217 IPR003340 GO:0003677
Mibi01g1922 251 SMART B3_2 130 222 IPR003340 GO:0003677
Mibi01g1922 251 CDD B3_DNA 128 219 IPR003340 GO:0003677
Mibi01g1922 251 MobiDBLite consensus disorder prediction 228 251 - -
Mibi01g1922 251 SUPERFAMILY DNA-binding pseudobarrel domain 123 220 IPR015300 -
Mibi01g1922 251 ProSiteProfiles B3 DNA-binding domain profile. 130 221 IPR003340 GO:0003677
Mibi01g1922 251 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 50 225 IPR044837 -
Mibi01g1922 251 MobiDBLite consensus disorder prediction 32 76 - -
Mibi01g1922 251 Coils Coil 6 33 - -
Mibi01g1922 251 MobiDBLite consensus disorder prediction 40 57 - -
Mibi01g1922 251 Coils Coil 218 238 - -
Mibi01g1922 251 Gene3D - 105 223 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1922 Mibi-ChrMibi01 28151106 28152314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1922 1 229 B3 DNA Binding Superfamily AT3G19184 62.069 3.09e-89 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi01g1922 B3 1.1e-14 CL0405