Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1901 ATGGGTGCTGCTGAAGAAGCAACGGCGGTAGAGAAGAAGTTTGAGGACTTTGAACCTCAAAAGAAACCCAAAAGGAACAAGTATGCTTTTGCTTGTGCCGTTTTGGCCTCCATGATTTCCATCCTACTTGGTTACGATTTAGGGGTGATGAGTGGGGCGGCCATATATATAAAGAGGGACCTGAAGGTGACAGATGTGCAGCTAGAGATATTGATGGGAATCATTAATCTGTACTCTCTGATTGGGTCGTGCCTCGCGGGAAGAACCTCAGACTGGATAGGAAGGCGGTACACAATAGTGTTGGCGGGAGGAATATTCTTTGCGGGAGCGATTCTGATGGGATTCTCTACCAACTACGCATTCCTCATGTTTGGAAGGTTTGTGGCTGGCATAGGCATAGGTTATGCCCTCATGATTGCCCCCGTCTATACCGCTGAGGTCTCCCCTGCTTCCTCCCGTGGCTTCCTCACTTCCTTCCCTGAGGTGTTCATCAACGGAGGAATCCTACTGGGCTACATATCAAACTACGCATTCTCCAAACTCCCACTTCGCCTAGGCTGGCGTCTCATGTTAGGAGTAGGCGCCATCCCATCAGTCCTCCTAGCCATAGTCACCCTAGCCATGCCCGAATCCCCACGCTGGCTCGTCATGCAAGGCCGTCTTGGCGAAGCCAAGAGAATCCTCCACAAAACCTCCGACTCCAACGAAGAAGCCCACCTCAGACTAGCCGACATCAAACAAGCCGCCGGAATCCCCCAAGACTGCCACGACGACATCGTACAAGTCCCCAAAAAGGAAAAAGTCGGCGCCGGCGTCTGGAAAGAACTCTTCCTCCACCCAACACCCGCCGTACGACACATCGTCATCGCCGCCATTGGTATCCACTTCTTCCAACAAGCCTCAGGCGTAGACGCCGTCGTTTTATACTCTCCAACCATATTCGAAAAGGCCGGTATTAAATCCGACACTGATAAGCTACTCGCAACCGTAGCCGTTGGATTCGTTAAGACAATGTTCATCTTAGTGGCTACATTTTTATTGGACCGGGTCGGGAGACGACCGTTATTGTTGACCAGTGTTGGGGGTATGGTAATCTCACTTGTTACGCTCGCTGTGAGCCTGACAGTCATTGATCATTCGAAGACAAAGCTGATGTGGGCCATAGTGGTGAGTATAGTGATGGTGTTGTCCTACGTGGCGACGTTTTCGATTGGTGCGGGGCCCATCACGTGGGTTTATAGCTCGGAGATATTCCCGTTGAAGCTACGCGCGCAGGGTGCGGCGGCGGGAGTGGTGGTGAATAGGGTGACGAGTGGTGTGATTTCGTCGACCTTTTTGTCGTTGGAGAAGGCGATTACTATTGGTGGGGCCTTCTTTTTGTTTGGGGCGATCGCAACCGTTGGATGGATCTTCTTCTTTTTTATGCTCCCCGAGACTCAGGGGAAGACACTTGAGGAAATGGAAGGGTCTTTTGGTAAATTCGGCAGCAATCATACGGAAGTTGATAAGGGGGGTGAAGTCAACGGTGATCACAAGGTTAACGGTAACGGCCAAATCCAATTGAGTTGA 1569 0.5112 MGAAEEATAVEKKFEDFEPQKKPKRNKYAFACAVLASMISILLGYDLGVMSGAAIYIKRDLKVTDVQLEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVLAGGIFFAGAILMGFSTNYAFLMFGRFVAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNYAFSKLPLRLGWRLMLGVGAIPSVLLAIVTLAMPESPRWLVMQGRLGEAKRILHKTSDSNEEAHLRLADIKQAAGIPQDCHDDIVQVPKKEKVGAGVWKELFLHPTPAVRHIVIAAIGIHFFQQASGVDAVVLYSPTIFEKAGIKSDTDKLLATVAVGFVKTMFILVATFLLDRVGRRPLLLTSVGGMVISLVTLAVSLTVIDHSKTKLMWAIVVSIVMVLSYVATFSIGAGPITWVYSSEIFPLKLRAQGAAAGVVVNRVTSGVISSTFLSLEKAITIGGAFFLFGAIATVGWIFFFFMLPETQGKTLEEMEGSFGKFGSNHTEVDKGGEVNGDHKVNGNGQIQLS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1901 522 ProSitePatterns Sugar transport proteins signature 1. 86 103 IPR005829 GO:0016020|GO:0022857|GO:0055085
Mibi01g1901 522 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 26 493 IPR045262 GO:0015144
Mibi01g1901 522 ProSiteProfiles Major facilitator superfamily (MFS) profile. 32 480 IPR020846 GO:0022857
Mibi01g1901 522 CDD MFS_PLT 35 487 IPR044776 GO:0005351
Mibi01g1901 522 Pfam Sugar (and other) transporter 33 489 IPR005828 GO:0016020|GO:0022857|GO:0055085
Mibi01g1901 522 FunFam probable polyol transporter 4 22 494 - -
Mibi01g1901 522 PRINTS Sugar transporter signature 40 50 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi01g1901 522 PRINTS Sugar transporter signature 415 427 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi01g1901 522 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi01g1901 522 PRINTS Sugar transporter signature 392 413 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi01g1901 522 PRINTS Sugar transporter signature 298 308 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi01g1901 522 TIGRFAM SP: MFS transporter, sugar porter (SP) family 20 487 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mibi01g1901 522 Gene3D MFS general substrate transporter like domains 22 493 IPR036259 -
Mibi01g1901 522 MobiDBLite consensus disorder prediction 502 522 - -
Mibi01g1901 522 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016020|GO:0022857|GO:0055085
Mibi01g1901 522 SUPERFAMILY MFS general substrate transporter 18 488 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1901 Mibi-ChrMibi01 27890288 27892865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1901 4 518 Organic Solute Cotransporters AT3G18830 70.769 0.0 758