Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1883 ATGTCAACCATCTCCGACCATTCCTCCTCCACCAACTTTCCTCTGCATGAACTCACAAAGACCACACCTTTTCTGGGTTTACAGCTCTACATCGTCATTTGCATTCTCCTCTTCATCTTCATCTTCCTTCTCCTCCTGATTTTCCTCTGCTTTCGCCGGAAACGAATCTCCTCCACCAACCCCTCTTCAATCGCCAGCCAAAGCTCCGGTGTTATTCCTTTGGTCTCCAAAGAGATCGTGGAGGTCGAAGCCTTTGATCTTCTTGGGAAAAATCTCAAGGTCAAAGGTCATGATCTGAAGAAGAAGCAGGTGGAAGAAGAAGAAGAAGACGAGGAGATCAATGTTGGATTTCGGAGAGGAAAACAGAGGAATGATGATGAGGTTGATGGTATGAAGATAGGGTGGGGCCGTTGGTACAGCTTGGAGGAGCTTCAGATTGCGACACGTGGGTTTTCTGATGAGAATGTGATCGGAGAAGGTGGTTATGGAATTGTTTATAAAGGGGTACTTCAAGATGGCTCTGTTGTTGCTGTCAAGAAACTTCTAAACAACAAGGGTCAAGCTCAGAAGGAGTTTAAGGTGGAGGTTGAGGCTATTGGAAAAGTGAAGCACAAAAATTTGGTAGGTTTAATAGGATATTGTGCAGAAGGTGCTCAAAGGATTCTTGTGTATGAATATGTTGAGAATGGAAACTTGGAGCAGTGGTTGCATGGTGAGGTAGGGCCTCCTAGCCCCTTAACATGGGATATACGTATGAGGATCGCGATAGGGACGGCTAAAGGATTAGCCTATTTGCATGAAGGGTTAGAACCCAAAGTTGTGCACCGAGATGTGAAATCTAGTAACATTCTCCTCGATAAAAGATGGAATGCAAAAGTATCAGACTTTGGACTGGCCAAACTCTTAGGATCCGAGAAAAGCTATGTGTCTACACGCGTGATGGGAACATTTGGATATGTTTCACCCGAGTATGCAAGCACTGGTATGCTTAACGAAGGTAATGACGTGTATAGTTTTGGAGTTCTACTGATGGAGATAATCACTGGAAGAAGTCCCATAGATTATTCAAGATCACCGGCAGAGATGAACTTGGTTGATTGGTTCAAAGGAATGGTGGCAAGTCGTCGTGGTGATGAGCTAGTAGATCCTAAAATCGAGACTAAGCCCTCACCAAGATCACTGAAAAGAGCTTTGCTGGTTTGTCTGCGCTGCATAGATATGGATGTCTGTAAGAGGCCAAAGATGAGTCAAATAGTTCATATGCTCGAGGCAGATGATTTTCCCTTTCGTTCTGAACTTCGGGCAGCTAGAGAGAAAGATCCTGTGCCTTCTCATGCAGCTGTTTCCAGCAAAATTTCATATCCACCAAGGCATTTGGAATCAGTTGAGAGATCAAGATGGCGATGA 1407 0.4456 MSTISDHSSSTNFPLHELTKTTPFLGLQLYIVICILLFIFIFLLLLIFLCFRRKRISSTNPSSIASQSSGVIPLVSKEIVEVEAFDLLGKNLKVKGHDLKKKQVEEEEEDEEINVGFRRGKQRNDDEVDGMKIGWGRWYSLEELQIATRGFSDENVIGEGGYGIVYKGVLQDGSVVAVKKLLNNKGQAQKEFKVEVEAIGKVKHKNLVGLIGYCAEGAQRILVYEYVENGNLEQWLHGEVGPPSPLTWDIRMRIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKRWNAKVSDFGLAKLLGSEKSYVSTRVMGTFGYVSPEYASTGMLNEGNDVYSFGVLLMEIITGRSPIDYSRSPAEMNLVDWFKGMVASRRGDELVDPKIETKPSPRSLKRALLVCLRCIDMDVCKRPKMSQIVHMLEADDFPFRSELRAAREKDPVPSHAAVSSKISYPPRHLESVERSRWR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1883 468 CDD STKc_IRAK 157 423 - -
Mibi01g1883 468 ProSitePatterns Protein kinases ATP-binding region signature. 157 180 IPR017441 GO:0005524
Mibi01g1883 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Mibi01g1883 468 SUPERFAMILY Protein kinase-like (PK-like) 130 423 IPR011009 -
Mibi01g1883 468 Gene3D Phosphorylase Kinase; domain 1 118 226 - -
Mibi01g1883 468 PIRSF TyrPK_CSF1-R 163 240 - -
Mibi01g1883 468 PIRSF TyrPK_CSF1-R 5 55 - -
Mibi01g1883 468 PIRSF TyrPK_CSF1-R 244 450 - -
Mibi01g1883 468 Pfam Protein kinase domain 152 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1883 468 Gene3D Transferase(Phosphotransferase) domain 1 227 433 - -
Mibi01g1883 468 SMART serkin_6 151 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1883 468 ProSiteProfiles Protein kinase domain profile. 151 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1883 468 FunFam Putative receptor-like serine/threonine-protein kinase 227 437 - -
Mibi01g1883 468 PANTHER OS01G0323000 PROTEIN 14 440 - -
Mibi01g1883 468 FunFam Probable serine/threonine-protein kinase At1g01540 131 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1883 Mibi-ChrMibi01 27643329 27646252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1883 33 425 Trihelix Transcription Factor Family AT1G70460 42.394 1.02e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mibi01g1883 Pkinase 8.5e-47 CL0016