Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1878 ATGGTGGATCGGCGAAGCCTAGTGTCTTTTGGGTTCTTCATCTCGTTGCTGTTTCCGTTCACATTTGAACAGATTCAGCCTCTCAGTTCAAACATAGAGCTTTCTGCACTTTTTGAACTTAGATCCTCTCTGGGCTTGAGGAGCAGGGAATGGCCAAGAAAAGTTGACCCTTGCTCTCTCTGGACGGGGGTCACGTGCGAGAATGGTAGAGTCATTGGGATCAATATTTCTGGGTTTAGAAGAACTCGTATTGGCAGGCTAAACCCACAATTTTCAGTTCAAGCCTTAGCCAATTTAACTCTCTTGCAATCTTTCAATGCCTCCAATTTTCTGCTTCCAGGTGCTATTCCTGACTGGTTTGGTTTACAGCTCTCATCTCTGAAAGTGCTTGATCTTCGGTCTTGTTCTGTGAATGGTGCTATTCCTTCCGGTTTAGGGAATTTAACAAACCTCACTAGTCTGTATTTATCTGATAATAATCTTACTGGGATTATCCCTGATAGTCTGGGTCAACTATTTAGCCTTTCAGTTGTTAACTTTTCTGGAAATTCTCTTTCTGGAACCATTCCAACATCATTTGTCTCTCTCGAGAATCTTTCCTCTATTGACATTTCCGCCAATTATTTGTCTGGTTCTATCCCTCCTGCCATTGGGGCCCTCATAAGGTTACAATACTTGAATCTTTCTGGCAACAGTTTAATGGCTTCTATTCCATCTCAGCTGGGAAATTTAAGTAGCTTGGTTGACCTTGATCTTAGTTATAATTCTTTGATTGGTGGGGTGCCTCCGGAATTAAGGGGGCTGAGGAGCTTGCAGAGAATGATACTAAGGAACAACATGCTTGATGGACTTTTGTCAGAGAACTTGTTTCCTACTTTGTCACAGTTGCAGGTGCTTGTGCTGAGACATAACAATTTCACTGGTGATCTACCTGATGCGCTGTGGTCTCTGCCGAGATTGAGCTATCTCGATCTTTCTGATAACAATTTCACTGGTATGCTTCCAAATTCTAGTTCCAATCAGAATGCGACTACTTCTGCTATGCTTGATATTTCCAACAACATGTTTTATGGAAGCCTAAGTCCTATTATCAGAAGGTTCAGTGTCATTGATTTGTCAAGCAATTATTTTGAGGGCAAGATTCTAGATTTCATGCTTAATGTATCTCTGAATACCAACTGCCTCCAAAATGTTACGAATCAGAGGACGGCTGGTGAATGTGCATCGTTTTATGCCGAGAGGGGCCTCACTTTCGATAATTTTGGACGCCCGAATTCAACGGTACCTCATGTGACAGAAAGCTCTCGAAAGAGCAATAAAGATAAGATTATATTGGCTGGAGTGTTGGGTGGATTTGGTTTGCTTATTATTTTGTTATTGCTATTGTTCTTGTTCCTTCTTTGTGCTCGTAAGAGGCGCAATTCAAGTCAAAGAGGAAATGGCGTGGGCCCTGCTCCTGCTGGGAGCAGTCCTCCCCCTCCTGGTATGTCAATCAATTTCATAAACGTGGGAGACTCATTTACAATACAGCAGTTGCTTCAGGCTACAGGGGATTTCAGCAATGCAAATCTTATCAAACATGGCCACTCTGGGGATCTCTTCAATGGTGTTTTGGAAAGTGGCATACCTGTAGTCATTAAAAGGATTGATGTTCGTACAGCTAAAAAAGATTCTTACCTAGTGGAATTGGACTTTTTCAGTAAGATTTCTCATACTAGATTTGTTCCTCTGCTTGGCCATTGCTTAGAAAATGAGAATGAGAAGTTGCTTGTTTATAAACATATGCCAAATGGGGACTTGTCGAATAGTCTTTATTACAAAAAAGCTACATCTGAAGATGGTACTTTGCAGTCATTGGATTGGATAACAAGGTTGAAAATTGCTATTGGAGCCGCGGAGGCTCTATCTTATATGCATCATGAGTGTAACCCTCCCTTTGTGCATAGAGATATTCAAGCAAGTAGTATACTTTTAGATGATAAATATGAAGTTCGGTTAGGTAGTCTAAGTGAAGTCTGCACCCAAGAAGGGGATAGTCATCAGAGCAAAATTACTAGGCTGCTAAGGTTGCCCCAGTCTTCTGATCCAGGCACATCTGGTTCATCTACATCAAATTGTGCCCATGATGTTTATTGCTTTGGTAAAATATTGCTTGGGTTGGTGACTGGGAAGATTGGAATCAGTGCCTCCAGCGATGCTGAATTTAAGGAATGGTTGGAACAGATGCTACCATACATCAGTATTTATGACAAGGAACTTGTAGCGAAAATTGTGGATCCATCTCTGGTTGTAGATGAGGATTTCCTAGAGGAAGTGTGGGCTATTGCTATTGTTGCAAGGTCTTGCCTGAATCCTAAACCTTCACGACGACCCCCGATGCGATATGTTCTCAAGGCACTAGAAAACCCCTTCAAAGTTGTGAGGGAAGAAGGCGTTGGCTCTTCACGGCTTAGAGCAACCTCTTCTAGAGGCTCTTGGAATGCTGCTTTGTTCGGTAGTTGGCGTCAGAGTTCATCTGATGTAACAGCAATCCCAGCAGTTTCTGGTACCAAAGTAGAAGGAGGGAGTAGTTTAAAGCATTCTGGAACTACCGGCTCTCAGGGTAGTGGCCAAAATGGTGGTGGTTCATCGTCCCGGAGGCGACATTCGAACGAAATATTCCCGGAGCCATCTAACGTACAGGATATAGAGAGGCCAGAGCAGGAATAG 2709 0.4275 MVDRRSLVSFGFFISLLFPFTFEQIQPLSSNIELSALFELRSSLGLRSREWPRKVDPCSLWTGVTCENGRVIGINISGFRRTRIGRLNPQFSVQALANLTLLQSFNASNFLLPGAIPDWFGLQLSSLKVLDLRSCSVNGAIPSGLGNLTNLTSLYLSDNNLTGIIPDSLGQLFSLSVVNFSGNSLSGTIPTSFVSLENLSSIDISANYLSGSIPPAIGALIRLQYLNLSGNSLMASIPSQLGNLSSLVDLDLSYNSLIGGVPPELRGLRSLQRMILRNNMLDGLLSENLFPTLSQLQVLVLRHNNFTGDLPDALWSLPRLSYLDLSDNNFTGMLPNSSSNQNATTSAMLDISNNMFYGSLSPIIRRFSVIDLSSNYFEGKILDFMLNVSLNTNCLQNVTNQRTAGECASFYAERGLTFDNFGRPNSTVPHVTESSRKSNKDKIILAGVLGGFGLLIILLLLLFLFLLCARKRRNSSQRGNGVGPAPAGSSPPPPGMSINFINVGDSFTIQQLLQATGDFSNANLIKHGHSGDLFNGVLESGIPVVIKRIDVRTAKKDSYLVELDFFSKISHTRFVPLLGHCLENENEKLLVYKHMPNGDLSNSLYYKKATSEDGTLQSLDWITRLKIAIGAAEALSYMHHECNPPFVHRDIQASSILLDDKYEVRLGSLSEVCTQEGDSHQSKITRLLRLPQSSDPGTSGSSTSNCAHDVYCFGKILLGLVTGKIGISASSDAEFKEWLEQMLPYISIYDKELVAKIVDPSLVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYVLKALENPFKVVREEGVGSSRLRATSSRGSWNAALFGSWRQSSSDVTAIPAVSGTKVEGGSSLKHSGTTGSQGSGQNGGGSSSRRRHSNEIFPEPSNVQDIERPEQE 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1878 902 MobiDBLite consensus disorder prediction 854 881 - -
Mibi01g1878 902 MobiDBLite consensus disorder prediction 475 494 - -
Mibi01g1878 902 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 30 189 - -
Mibi01g1878 902 Gene3D Ribonuclease Inhibitor 30 194 IPR032675 -
Mibi01g1878 902 FunFam Leucine-rich repeat receptor protein kinase EMS1 190 288 - -
Mibi01g1878 902 SUPERFAMILY Protein kinase-like (PK-like) 494 800 IPR011009 -
Mibi01g1878 902 Pfam Protein tyrosine and serine/threonine kinase 524 796 IPR001245 GO:0004672|GO:0006468
Mibi01g1878 902 Gene3D Transferase(Phosphotransferase) domain 1 595 811 - -
Mibi01g1878 902 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 292 423 - -
Mibi01g1878 902 PANTHER RECEPTOR-LIKE PROTEIN 55 303 802 - -
Mibi01g1878 902 SMART LRR_typ_2 148 171 IPR003591 -
Mibi01g1878 902 SMART LRR_typ_2 268 292 IPR003591 -
Mibi01g1878 902 SMART LRR_typ_2 293 316 IPR003591 -
Mibi01g1878 902 SMART LRR_typ_2 317 340 IPR003591 -
Mibi01g1878 902 SMART LRR_typ_2 220 244 IPR003591 -
Mibi01g1878 902 MobiDBLite consensus disorder prediction 849 902 - -
Mibi01g1878 902 SUPERFAMILY L domain-like 59 419 - -
Mibi01g1878 902 Pfam Leucine rich repeat 222 281 IPR001611 GO:0005515
Mibi01g1878 902 Pfam Leucine rich repeat 286 330 IPR001611 GO:0005515
Mibi01g1878 902 Pfam Leucine rich repeat 149 209 IPR001611 GO:0005515
Mibi01g1878 902 Gene3D Phosphorylase Kinase; domain 1 497 594 - -
Mibi01g1878 902 ProSiteProfiles Protein kinase domain profile. 519 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1878 902 FunFam Predicted protein 489 594 - -
Mibi01g1878 902 FunFam Putative LRR receptor-like serine/threonine-protein kinase 595 820 - -
Mibi01g1878 902 ProSiteProfiles Leucine-rich repeat profile. 150 171 IPR001611 GO:0005515
Mibi01g1878 902 Gene3D Ribonuclease Inhibitor 198 404 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1878 Mibi-ChrMibi01 27618165 27623046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1878 37 692 Miscellaneous Gene Families AT2G16250 58.006 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Mibi01g1878 PK_Tyr_Ser-Thr 1.4e-17 CL0016