Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1877 ATGGCTGCCGCAGATGTTGAGTTCCGTTGCTTTGTCGGTGGCCTCGCTTGGGCTACCGACAACGATGCCCTTAGCCAAGCCTTCGCTCCTTTTGGCGATGTTATCGAATCGAAGGTTATCAACGATCGTGAGACCGGAAGGTCAAGAGGGTTCGGATTCGTGACCTTCTCCTCAGAGCAGGCCATGAAGGACGCGATCGAAGGAATGAACGGTCAGAGTCTTGATGGCCGCAATATCACCGTGAACGAAGCTCAGTCTCGCGACGGCGGCGGCGGAGGAAGGAGCGGCGGCGGTTACGGCGGAGGCAGTGGATATAGCCGTGGTGGTGGTGGATACGGTGGCGGTGGACGCCGTGAGGGCGGATATAGCAGGAACGGTGGTGGAGGATATGGTGGCGGAGGCGGTTATGGTGACCGTGGATCTCGCTACTCTCGTGGTGGTGATTCTGATGGAAGCTGGAGAAATTGA 468 0.5791 MAAADVEFRCFVGGLAWATDNDALSQAFAPFGDVIESKVINDRETGRSRGFGFVTFSSEQAMKDAIEGMNGQSLDGRNITVNEAQSRDGGGGGRSGGGYGGGSGYSRGGGGYGGGGRREGGYSRNGGGGYGGGGGYGDRGSRYSRGGDSDGSWRN 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1877 155 Gene3D - 2 106 IPR012677 -
Mibi01g1877 155 SUPERFAMILY RNA-binding domain, RBD 8 116 IPR035979 GO:0003676
Mibi01g1877 155 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Mibi01g1877 155 SMART rrm1_1 9 82 IPR000504 GO:0003723
Mibi01g1877 155 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 5 142 - -
Mibi01g1877 155 MobiDBLite consensus disorder prediction 68 155 - -
Mibi01g1877 155 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1877 Mibi-ChrMibi01 27594348 27595069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1877 8 88 Eukaryotic Initiation Factors Gene Family AT2G23350 30.864 7.41e-06 43.1