Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1874 ATGGCTTCAAGCTCTCTCAGCAAAAAGAAGCAGGCCTCTGATTCATCTTGGACACCTAAACAGAACAAGCTGTTTGAAAAGGCTCTTGCAAAATATGACAAGGAGACTCCTGATCGATGGCAGAATGTGGCTAAAGCAGTTGGTGGAAAATCAGCTGAGGAAGTTAAGAGACATTATGAAATACTCTTAGAGGATTTAAGGCACATTGAATCTGGTCGTGTTCCCATCCCCAACTACAAATCCTCTGACAATGCTGATGAAGAAGAGAGGCTTATGAGGTATCTTCAGCTGAATTGA 297 0.4242 MASSSLSKKKQASDSSWTPKQNKLFEKALAKYDKETPDRWQNVAKAVGGKSAEEVKRHYEILLEDLRHIESGRVPIPNYKSSDNADEEERLMRYLQLN 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1874 98 Pfam Myb-like DNA-binding domain 15 59 IPR001005 -
Mibi01g1874 98 ProSiteProfiles Myb-like domain profile. 9 63 IPR001005 -
Mibi01g1874 98 Gene3D - 8 76 - -
Mibi01g1874 98 SMART sant 13 65 IPR001005 -
Mibi01g1874 98 FunFam Transcription factor SRM1 9 76 - -
Mibi01g1874 98 ProSiteProfiles SANT domain profile. 12 67 IPR017884 -
Mibi01g1874 98 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 88 IPR044636 GO:0003700
Mibi01g1874 98 MobiDBLite consensus disorder prediction 1 20 - -
Mibi01g1874 98 CDD SANT 16 63 IPR001005 -
Mibi01g1874 98 SUPERFAMILY Homeodomain-like 15 71 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1874 Mibi-ChrMibi01 27529335 27530047 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi01g1874 Myb_DNA-binding 1.8e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g1874 01 27529335 27530047 Mibi01g1874 01 27529335 27530047 ECH
Mibi01g1874 01 27529335 27530047 Mibi10g0051 10 850150 850365 ECH
Mibi01g1874 01 27529335 27530047 Mibi12g1989 12 36164133 36164354 ECH