Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1873 ATGTTGCGTTGTCTGAACAGTTCAGATAATAATCTTGCCGACTCATGCTCCGACATTACATTGTTAGACAGGCTCAAATGCCAACAACCTCAGTTTCATCATCAACAACAGAGCTTCTTTCATGGTACTAATGGATTTGACCCTGCCTCCTTCTCTCCTCAACAGCTTCCCACTTCTGCCACCTTCATGATCGTCAACGATAATGGCGGCGGCCTTGCTGACGTGGCAACCTCCGTCCAACCCGACCCGCTTCCCCAAAATGGGTGCCCCGACTTGCCTTCTATGGGGTTCGTGTCTTCCGCATTTAATGCCAACTCTTCCGTTTCGAGGACTTCTAGCTGCCCACCATCTGTGGCTGCAGCGGAGAAAATGAGATCCACTAGTGGGAGAGAGAACTTGAAGAAGAGGAAATCTGATAAAGCTCACATCCCCAAGGGTGTTGCAGAGAATGAGAAGAACAAGAGAATCAAAACAAGTGGGGAAGAAGGGGAATCCAAAGTCACTACAGAAAATAATAATAATAATAATAATAATAATAATAATAATAATGACAAGAACAGAGAAACATCAGGGGAATCTTCGAAAGAGAATTCAAAAGTATCTGAGGTTCAAAAACAAAAGCCCGACTACATTCATGTCCGAGCACGTCGTGGACAAGCCACTGATAGCCATAGCTTAGCAGAGAGAGTTAGAAGGGAGAAAATAAGTGAGAGAATGAAGTACTTGCAAGGATTAGTGCCTGGTTGTAACAAAATCACAGGAAAGGCGGGAATGCTCGATGAAATCATCAATTATGTTCAGTCTCTTCAAAGACAAGTGGAGTTTTTGTCAATGAAACTAGCTGCTGTAAACCCAAGGATTGACTTCAATATTGACGATCTGTTCACCAAAGAGGTTTTTCCTGCTTGTGCCCCTACCAGTTTTCCAGCCATAGATATGCCACCTAATCCCGCTTTTCTTCAGTTTGATCCAACAACACAACATGTTGCTTCATGTTCTGGATTAGATTTGGGAATGATAAACCCTTCAGATTTAGGACTTCGAAGGACCATTAGTGCCCCTGTATCTTTGCCTCACGAAACGTTTCTTGACTCTTCCTGTTTCAATCAAATTCTGCCATTTTCAACCTGTGAAGATGATTTGCAGAACCTGTACAATGTGGGTTTTGATCAAGCCAGATCATCAACGACATCCTCTTTTCCTTCTCAGCCATTCACAGGCCTAATTGAAGCTAGCAATCTAAAGATGGAGATGTGA 1257 0.432 MLRCLNSSDNNLADSCSDITLLDRLKCQQPQFHHQQQSFFHGTNGFDPASFSPQQLPTSATFMIVNDNGGGLADVATSVQPDPLPQNGCPDLPSMGFVSSAFNANSSVSRTSSCPPSVAAAEKMRSTSGRENLKKRKSDKAHIPKGVAENEKNKRIKTSGEEGESKVTTENNNNNNNNNNNNNDKNRETSGESSKENSKVSEVQKQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQGLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRIDFNIDDLFTKEVFPACAPTSFPAIDMPPNPAFLQFDPTTQHVASCSGLDLGMINPSDLGLRRTISAPVSLPHETFLDSSCFNQILPFSTCEDDLQNLYNVGFDQARSSTTSSFPSQPFTGLIEASNLKMEM 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1873 418 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 109 312 IPR024097 GO:0006355
Mibi01g1873 418 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 217 288 IPR036638 GO:0046983
Mibi01g1873 418 Gene3D - 216 289 IPR036638 GO:0046983
Mibi01g1873 418 CDD bHLH_AtBPE_like 209 294 - -
Mibi01g1873 418 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 219 269 IPR011598 GO:0046983
Mibi01g1873 418 MobiDBLite consensus disorder prediction 188 210 - -
Mibi01g1873 418 MobiDBLite consensus disorder prediction 127 164 - -
Mibi01g1873 418 Pfam Helix-loop-helix DNA-binding domain 223 270 IPR011598 GO:0046983
Mibi01g1873 418 MobiDBLite consensus disorder prediction 165 187 - -
Mibi01g1873 418 MobiDBLite consensus disorder prediction 123 210 - -
Mibi01g1873 418 SMART finulus 225 275 IPR011598 GO:0046983
Mibi01g1873 418 FunFam Basic helix-loop-helix transcription factor 216 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1873 Mibi-ChrMibi01 27497868 27500959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1873 126 388 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 47.101 3.16e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g1873 HLH 9.4e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g1873 01 27497868 27500959 Mibi01g1873 01 27497868 27500959 ECH