Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1833 ATGATGAGGGAGATGATGATAAGAGAAGGAAAAGGAAGAGAAGTGAGCAAGTGCCAAGACTGCGGGAACCAAGCAAAGAGGGGTTGTGAATTCATGAGATGCAGAACTTGTTGTAACAACAAACACCTTCCCTGCCAAACTCATATCAATAGCACTTGGGTTCCTACCTGTAGTAGGAGACGCCACCTTCATCATCAACCTCTCCCTCGAACCCTTACTCACAACAATAATCCATCTCCAGGAGTAGGGGAATTGAATAGGCTTCCAGCTACCATGAGTTCGCCCGCAGTGTTTCGATGTGTTCGGGTGCGTTCAGAGGATGATACGGTTGATGAATATGCATATCAGACGTCAGTGAACATAGGAGGACGTGTGTTTAGCGGTGTTCTTTATGATCAAGGCCAGGAAAACTTCTTCTGCCATAACAACAACGTTAATGTTGGTCAAAGTTCCAAAGGCCCTCTCAATCTGATTCCTCATGATGACCAGTATGACCATTTCATGGGCACTTCAATGATTCAATCCCATGAAGATGATGCTGCCACTGCTAGTCCTGCTGTGCCTCCATTAATGATCTCACCTTCTTCTTCTGCTGAGCATTTTTCTTCTTCTCTGTCATCATATCCTCTCTCACTTGCAACCTTTAGGCCTCCTCTATCATACTTCACTCACCCAAAGACTTCCTAG 687 0.4527 MMREMMIREGKGREVSKCQDCGNQAKRGCEFMRCRTCCNNKHLPCQTHINSTWVPTCSRRRHLHHQPLPRTLTHNNNPSPGVGELNRLPATMSSPAVFRCVRVRSEDDTVDEYAYQTSVNIGGRVFSGVLYDQGQENFFCHNNNVNVGQSSKGPLNLIPHDDQYDHFMGTSMIQSHEDDAATASPAVPPLMISPSSSAEHFSSSLSSYPLSLATFRPPLSYFTHPKTS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1833 228 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 17 58 IPR006510 -
Mibi01g1833 228 MobiDBLite consensus disorder prediction 68 88 - -
Mibi01g1833 228 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 10 160 IPR007818 GO:0003700|GO:0006355
Mibi01g1833 228 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 87 134 IPR006511 -
Mibi01g1833 228 Pfam Domain of unknown function (DUF702) 16 66 - -
Mibi01g1833 228 Pfam Domain of unknown function (DUF702) 86 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1833 Mibi-ChrMibi01 26893357 26894368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1833 5 134 C2H2 Transcription Factor Family AT2G21400 50.350 3.94e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mibi01g1833 DUF702 3.4e-19 No_clan