Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1829 ATGAAGATCCAATGTGATGTTTGTGAGAAAAAGGAAGCTTCAGTGTTCTGTGCTGCAGATGAAGCAGCTCTCTGCCATGGATGTGATTCAAGTATCCACCATGCCAATAAGCTTGCAGGCAAACACATACGCTTCTCTCTTCACCATCCCACCTCTAAAGATTCCCCTTACTGTGATATCTGCCAAGAGAAGAGAGCATATCTATTTTGCAAAGAAGACAGAGCAATACTATGCAGAGAATGTGACCTTAACATTCACAGAACCAATGAACATACCCTGAAACACGATAGATTTCTTCTCACAGGCATTAAGCTTTCTGATTCTTCTTCTTCTTTTTCTTCTGGGGACCCATCTTCATCTTCCTGCAATAATAATGCCATAGCCACTGAGCATAGAAGAGATGGTAATGGAAGAAGATCGAGTCGGAATAATAATTCCAACACAAACAGAGCAAGATGGGATTGCAATAATAATTATAATAATGAGAATTTCAGTTCTTCTGTGAATTCGGATAATATGGTTAGTGACACAGAAGCAGTTTCTACTAGCAGCTTCTCTGAGTATTTGATTGAGACCATACCTGGCTTTTGCTTTGAAGACCTTATTGATGCTTCCTTTCCACCTCTCTGTAAGAATAAGGATGAGCATGATCCTACATTTGATGATGAATATGAAGATCTTCAAGTTAGAATGGGTTTATATCCAAGAACAGACGCGGCAAAAGAAATATTGGAATGGAAGCAAAATGGCTTCCGCTAA 759 0.3939 MKIQCDVCEKKEASVFCAADEAALCHGCDSSIHHANKLAGKHIRFSLHHPTSKDSPYCDICQEKRAYLFCKEDRAILCRECDLNIHRTNEHTLKHDRFLLTGIKLSDSSSSFSSGDPSSSSCNNNAIATEHRRDGNGRRSSRNNNSNTNRARWDCNNNYNNENFSSSVNSDNMVSDTEAVSTSSFSEYLIETIPGFCFEDLIDASFPPLCKNKDEHDPTFDDEYEDLQVRMGLYPRTDAAKEILEWKQNGFR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1829 252 FunFam B-box zinc finger protein 21 1 98 - -
Mibi01g1829 252 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Mibi01g1829 252 Gene3D Classic Zinc Finger 1 95 - -
Mibi01g1829 252 SMART bboxneu5 4 47 IPR000315 GO:0008270
Mibi01g1829 252 SMART bboxneu5 53 100 IPR000315 GO:0008270
Mibi01g1829 252 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 213 - -
Mibi01g1829 252 MobiDBLite consensus disorder prediction 109 130 - -
Mibi01g1829 252 CDD Bbox1_BBX-like 5 47 - -
Mibi01g1829 252 Pfam B-box zinc finger 55 93 IPR000315 GO:0008270
Mibi01g1829 252 MobiDBLite consensus disorder prediction 109 153 - -
Mibi01g1829 252 CDD Bbox1_BBX-like 58 100 - -
Mibi01g1829 252 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1829 Mibi-ChrMibi01 26855423 26856913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1829 1 207 C2C2-CO-like Transcription Factor Family AT1G75540 50.718 2.47e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi01g1829 zf-B_box 1.1e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g1829 01 26855423 26856913 Mibi01g1829 01 26855423 26856913 ECH
Mibi01g1829 01 26855423 26856913 Mibi12g2050 12 36891246 36893328 ECH