Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1813 ATGAATCCCCTCAAATTCTCTCCCCTCCCTCTCTTCATAATAACCATCATCTTCTTGCCGGAGCCAGGAATAATGGCTCACCATGATTATGGAGAAGCATTGTCAAAAGCAATATTGTTCTTTGAGGGACAGAGATCTGGATATCTTCCGGAAGACCAGAGAATGAGGTGGAGAGACCACTCAGGGCTCAGTGACGGCTGGCATTTCAACACTGACCTCACCGGCGGCTACTATGACGCCGGCGACAACGTTAAGTTCGGTTTTCCGATGGCTTTCACCGCCACAATGCTCGCCTGGAGCGTCGTCGAGTTCGGAGACTATATGCCTCCTCATGACCTCCGTCACTGCCTTGTTGCTATTCGCTGGGCCTCTGATTATTTGCTCAAGACTGTGTCTCAGCCTGATCGGATTTTCGTTCAGGTGGGAGATCCAAAATCAGACCATAACTGTTGGGAGAGGCCAGAGGACATGGACACAGACCGTACAGCTTACGCCGTTGATGCACCGAATCCTGCTTCCGACATCGCCGGCGAAACAGCCGCCGCACTTGCCGCCTCATCGATGGTGTTCCGGTCATCGGACCCCGGATATTCCGACACACTTTTACGAAATGCCATCAAGGCATTTCTGTATGCTGATAACTACAGAGGTGCTTACACTGACAATGAACATGTTAGGGAAGGTGCCTGCCCTTATTATTGCAACTTTGGAGGCTACCAGGATGAGTTGTTATGGGGAGCAGCATGGCTAAGGAGGGCAACAGGGGAGGATGATTTCTTAGACTACGTGCAATACAATGCCAAAGCTTTTGGTGCTGATGAAAACATCAATGAGTTTGGCTGGGAAAACAAGCACGCTGGCCTCAATGTTCTTGTCTCCAAGGAAGTAATAGATGGAAGCATGGACACTATACAATCCTACAAGGAATCAGCAGAGAGCTTCATATGCACACTAATACCACAAGCACCAACCTCCCAAATCCAATACACTCCAGGAGGCCTCATTTACAGACCAGGAGGCAGCAATCTACAACATGCAACTTCTCTCTCCTTCCTCCTACTTGTTTACGCCAACTATCTCTCTCGCTCCTCCCAAACCCTAACCTGTGGGACCCTCTCCAACATCACTCCTCAAACCCTTCGTCTCATTGCCAAAAAACAAGTTGACTATATCTTAGGAGACAACCCTAAGAAAATGTCTTATATGGTAGGGTATAGTGACTTCTACCCTCAAAGGATTCACCATCGTGCTTCTTCTTTGCCTTCCGTTAAAGACCATCCTCAGTTTATTGCATGCAAGGGTGGTACTGTTTATTTCAATTCTTCTAACCCTAACCCTAATGTTCTTGTTGGTGCTCTTGTTGGAGGGCCCGAGGAAGATGATGAGTATGAGGATGATCGTGCCAATTTTAGAAAGTCTGAGCCTACTACTTATATTAATGCTCCTTTTGTTGGGGTTTTGGCTTACTTTGCTGCTAATCCGGACCCTTGA 1491 0.4775 MNPLKFSPLPLFIITIIFLPEPGIMAHHDYGEALSKAILFFEGQRSGYLPEDQRMRWRDHSGLSDGWHFNTDLTGGYYDAGDNVKFGFPMAFTATMLAWSVVEFGDYMPPHDLRHCLVAIRWASDYLLKTVSQPDRIFVQVGDPKSDHNCWERPEDMDTDRTAYAVDAPNPASDIAGETAAALAASSMVFRSSDPGYSDTLLRNAIKAFLYADNYRGAYTDNEHVREGACPYYCNFGGYQDELLWGAAWLRRATGEDDFLDYVQYNAKAFGADENINEFGWENKHAGLNVLVSKEVIDGSMDTIQSYKESAESFICTLIPQAPTSQIQYTPGGLIYRPGGSNLQHATSLSFLLLVYANYLSRSSQTLTCGTLSNITPQTLRLIAKKQVDYILGDNPKKMSYMVGYSDFYPQRIHHRASSLPSVKDHPQFIACKGGTVYFNSSNPNPNVLVGALVGGPEEDDEYEDDRANFRKSEPTTYINAPFVGVLAYFAANPDP 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1813 496 PANTHER ENDO-1,4-BETA-GLUCANASE 21 491 - -
Mibi01g1813 496 Pfam Glycosyl hydrolase family 9 30 487 IPR001701 GO:0004553|GO:0005975
Mibi01g1813 496 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 463 481 IPR033126 -
Mibi01g1813 496 SUPERFAMILY Six-hairpin glycosidases 19 492 IPR008928 GO:0005975
Mibi01g1813 496 FunFam Endoglucanase 26 494 - -
Mibi01g1813 496 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 390 416 IPR018221 -
Mibi01g1813 496 Gene3D - 26 493 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1813 Mibi-ChrMibi01 26538710 26542130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1813 28 495 Glycoside Hydrolase AT4G39000 60.981 0.0 593