Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1805 ATGAATGCCTTAACGGAAGCATCCCATTCCCATAGCCAATCCAACCCTTCTGATATGGACGAGCCTGTGGCTGTGACGAAGGCCGTACCAGTTTCTGAGATGTTGGGAGAGGAGAAATCTTCGAATGGGTTAACTCAGCGAACGCCGGAGCAACTCGTGGCCAAAGCCATAGCTCCTGTGAAGGTGGAATACCTTCGTCCTCCTCCTGCTAGAGCTTCATCCACAACCCAGAATGAAGGTGTTTCTGAAGATAAGGATAAGGCCTCTGTTCAACCTGCTGGATTGGTCAAGGAGAAAAAATCGAAACGCCAACTCAAGCGTGAGCGTCGTCAGGAACAGAAGTCTACTAAACATATTTGTCCGGAAGTTGCCAAGACTGGAGATATCAGTTCATGTCCTTATAAGGACAAATGCCGCTTCAGCCATGACTTAGAAGCCTTCAAGGCCCAGAAGCCGACTGATTTAGAGGGAGAGTGCCCTTTTATTAAAGGTGAAGGTTCTTGTCCTTATGGGTTAGCATGCAGATTTTCCAGCACGCATCCAGAAGGTATGCCTTCTAGCAATCTCAGTGATCGGAGAACAACTTCTGAAATAAATGGACTGAACAAAGATGTTCAAAAGCTGTTATGGAAAAATAAGATGCGCTTCCCCAAGGCAGATGCGAAACTCAAAGCTCTTGGACTCTGGGAATCGTCTAAGTTAAAACGGAACAACTTAGAAGAGAAGAAGTGTGGCAATGATGATTCAAATAATTGCCACAATGCTGATAATAATGGCTCTAGTGATGTTACAAATGACTTGGGTTCTAATTTAGAAATCTCTGCTGAGGACACAAAAGTTGATGGCATTGATGGAAATTTAGATTCTGATTCACCTTGCCCTCAAAAGAGAAGAAAAACTGAAGAAAATTCTGGCATTGATGTGGCAGAAAATGAAGGTGTGTGTGTTACTGACCAAAACATTGAAAAAAGATACATACAAGCAGAAAGCGCAGCTGTAACTGATGTCATACCCCCTGAAACTGATAAAAGCATGAAGATACACCCACGAGAAAAGAAGCTTATTGATTTCAGAGATAAGTTGTATCTTGCTCCCTTGACCACTGTTGGGAATCTCCCATTCAGGAGGGTTTGCAAAGTATTAGGAGCCGATGTAACATGTGGTGAAATGGCAATGTGCACAAATCTTTTGCAGGGTCAAGCATCAGAATGGGCATTGCTGAGACGTCATGTATCAGAAGATTTATTTGGCGTGCAAATATGTGGGGCATATCCAGACACTATTGCACGAACTGTAGAACTGATAGAGAAGGAATGTTCAATTGATTTTATTGATATAAATATGGGTTGCCCGATTGATATTGTTGTTAATAAGGGTGCTGGATCAGCTCTTCTTACAAAACCAATGCGAATGAAAAGTATTGTGGAGGTTGCCTCAGGCACAGTGGAGAAACCTATAACTATCAAGGTACGAACAGCTTATTTTGAAGGAAAAAACCGCATTGATTCTATTATTGGGGACGTGGGCTCTTGGGGATCCAATGCAGTTACAATACATGGTAGATCACGCCAACAAAGATACAGCAAGCTTGCTGACTGGGACTATGTTTACCAATGTGCTAGGAAGGCTCCTAATACTTTGCAAGTAATAGGGAATGGAGATGTTTTTTCATTTGTTGACTGGAACAACCACAAGGCTGAATGCACTGAGCTTGCCACATGCATGATTGCCCGTGGTGCACTGATTAAGCCGTGGATATTTACAGAAATCAAGGAACAAAGGCACTGGGACATTAGCTCTGGGGAGCGATTGAATATTTTGAAAGATTTTGCACGTTTTGGTCTTGAACACTGGGGTTCTGATACGAAAGGAGTGGAAACAACCAGACGGTTTTTATTGGAATGGCTTAGCTACACATGTAGATATGTACCTGTTAGCCTTTTAGATGTTATTCCACAAAGACTAAACTGGCGTCCACCTTCTTACTACGGGCGTGATGACCTTGAGACTCTAATGGCTTCAGACTCTGCAGCTGACTGGATACGAATATCAGAGATGTTACTCGGCAAAGTTCCAGATGGCTTTTCATTTACGCCAAAGCACAAGTCAAATGCTTACGATAGTGCTCAGAATGGCTGA 2139 0.4296 MNALTEASHSHSQSNPSDMDEPVAVTKAVPVSEMLGEEKSSNGLTQRTPEQLVAKAIAPVKVEYLRPPPARASSTTQNEGVSEDKDKASVQPAGLVKEKKSKRQLKRERRQEQKSTKHICPEVAKTGDISSCPYKDKCRFSHDLEAFKAQKPTDLEGECPFIKGEGSCPYGLACRFSSTHPEGMPSSNLSDRRTTSEINGLNKDVQKLLWKNKMRFPKADAKLKALGLWESSKLKRNNLEEKKCGNDDSNNCHNADNNGSSDVTNDLGSNLEISAEDTKVDGIDGNLDSDSPCPQKRRKTEENSGIDVAENEGVCVTDQNIEKRYIQAESAAVTDVIPPETDKSMKIHPREKKLIDFRDKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHVSEDLFGVQICGAYPDTIARTVELIEKECSIDFIDINMGCPIDIVVNKGAGSALLTKPMRMKSIVEVASGTVEKPITIKVRTAYFEGKNRIDSIIGDVGSWGSNAVTIHGRSRQQRYSKLADWDYVYQCARKAPNTLQVIGNGDVFSFVDWNNHKAECTELATCMIARGALIKPWIFTEIKEQRHWDISSGERLNILKDFARFGLEHWGSDTKGVETTRRFLLEWLSYTCRYVPVSLLDVIPQRLNWRPPSYYGRDDLETLMASDSAADWIRISEMLLGKVPDGFSFTPKHKSNAYDSAQNG 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1805 712 MobiDBLite consensus disorder prediction 80 101 - -
Mibi01g1805 712 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 110 190 - -
Mibi01g1805 712 MobiDBLite consensus disorder prediction 241 304 - -
Mibi01g1805 712 MobiDBLite consensus disorder prediction 250 272 - -
Mibi01g1805 712 SMART c3hfinal6 155 182 IPR000571 GO:0046872
Mibi01g1805 712 SMART c3hfinal6 115 144 IPR000571 GO:0046872
Mibi01g1805 712 CDD DUS_like_FMN 360 595 IPR035587 -
Mibi01g1805 712 Coils Coil 95 115 - -
Mibi01g1805 712 MobiDBLite consensus disorder prediction 1 20 - -
Mibi01g1805 712 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 356 598 - -
Mibi01g1805 712 ProSiteProfiles Zinc finger C3H1-type profile. 158 183 IPR000571 GO:0046872
Mibi01g1805 712 Gene3D Aldolase class I 356 598 IPR013785 -
Mibi01g1805 712 ProSiteProfiles Zinc finger C3H1-type profile. 114 145 IPR000571 GO:0046872
Mibi01g1805 712 ProSitePatterns Uncharacterized protein family UPF0034 signature. 444 462 IPR018517 GO:0008033|GO:0017150|GO:0050660
Mibi01g1805 712 Pfam Dihydrouridine synthase (Dus) 363 598 IPR035587 -
Mibi01g1805 712 MobiDBLite consensus disorder prediction 1 117 - -
Mibi01g1805 712 SUPERFAMILY FMN-linked oxidoreductases 360 673 - -
Mibi01g1805 712 Gene3D - 109 191 - -
Mibi01g1805 712 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 48 706 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mibi01g1805 Dus 2.6e-49 CL0036