Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1795 ATGGGAGGGGTTGCAATACTAGCTTATGAGAATGCCCAGGAGCTCACCATCCGCTTGATGCTGCCTACAATATGGCAAAGTCAGACAGTCAGTGATATTATTCCACAAATTTTTATATGGCCTAAAACAAACGAATCAGGCCCATCGTCTTCCCAGCGGGAAAAACAAATAGCGCCACGTCAGCAACGTTTTGGATCAGCATCATCATCTCCCACACCAACAAAGCTTCTTGCTCTCTGGTTTTCTCATAGCTCACTCCCTCCTCTCCTTCCTGCTAATATTGCCAATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCCATGGAAGTTAGCCTCACTTCCAGTCACTACACTCTTAGCTTAACCTCACGTTCTTCTTCTTCTTTCTCTCTTCCCAATCTCCCATCCATCCGTACGCAATTCCTTGGTTCTTCTCATAATCTAAGGCCTCCAGGATGTGTTCGCTCTAGAAATCGTAAATGCAAGAAGATTCGGCTTCTTCACATCCATTCTCCTCGTTTTATCTTCAAAGCATCTTTGACTTCTCCCTCCGTCGTTGTCGCCATCACCTTGGTTACTTTATCTGCTGTTTCTCTGTTTTACCATAATTACATCAAGAGAAAGAAAAACACAAAAGAGATACTGGGACACCCAAAATTTGCATTATCACAGCAAGGAAGTAACATCGGGAATCAGGCTATCGAAAGTCAGATTCTTTGCTTTCAGGAATTTCAAGGGGAGAACTTGCTAAAGGAAATTGCGATATTGGAGGATAAATCTGACAGAGAAAACCATGATTTTGAGGGCAAAGAGGCCCAACTAACATATTGCACATCTGTTAAGGTGCAAGGAGAGGCCGTTGTGACTGAGAAATCAAAGTCACCTTCTGATGTTCTGACCTCAAGCATTAACACTGCTTCATCTTCAAACAGTTCCAAGGTTGTAGATGAATCTCATTTGTCCATGGAATTCCAATCAAGTTCTTTTGAGCCTCTATCTTTTGCTGCAGAGATGACTGAATTACTAGTGGAAGAAACAAGAGATAAAGCTCACTCTGATTCTGAGTTGCCTATAATTATAAATAAACCCGAGCATACTACTTCTTTAGATCCTTTAAACAATGAATTCACAATAGTGAAAGATCATGGCAAAGAAAAAAATGAACTTGGTGCCATCACTAGCGACGTCTTAGTTGGCGAATCTGCTAGGCAAGAACTGTACATGTTTTATCAAGTCAACATGTCTTCAACAGGATCCATGTCACCATTGAATGGTTTAAAATCGCAACCTTCTCATTCTTTTTTCATGAAGAAAAAAGAATTGCAATCCACAATGGTGAATAATGCTTTAAAAGGACCAGAATCATTAAAAGAGGTTTCAGAGAATGTTGAAGGAGTGGAACCAAGAGCCAGTTACGAAGAAGGCGGCAATTGCCAGCAAAACGGAAGTCGTTCCTTGAGGAAGCGGAAGAGCTCTCTGAGCAACAGGGGAAACACTGATCTAAATCAGAAAAGTAGCGAACTAATTCCCCAGAATTCTGACCCAATCAGAGAGCATGTTGATAAGGAAAATCGACATTCTCAACATCTTATAGCATATAATTCTTTGCTAAAAGATGGAAGGTTACATGAATGTGTTGAAGTGCTGAAAGACATGGAGATGAAGGGAATTTTAGATATGACTAAGGTTTATCATGCAAAGTTTTTTAACAACTGCAAGCAACAAAAGGCTGTTAGAGAAGCTTTTGATTACATCAAACTTGTTCCAAATCCAAAATTGAGCACATTTAATATGCTTATGTCCGTGTGTTCAAGCTCTCGAGATTCAGAAGGGGCTTTCCAAGTTCTGCAGCTTGTTCAGGGGGCTGGATTGAAATCTGATTGTAAGTTATATACCACTTTGATATCAACATGTGCCAAGAGTGGTAAAGTCGATCAGATGTTTGAGGTATTTCACAATATGGTGAATTCTGGAATTGAACCTAATGTTCATACCTATGGGGCACTTATTGATGGTTGTGCCAGAGCTGGGCAAGTTGCTAAAGCATTTGGTGCTTATGGGATAATGAGGTCTAAGAAATTGAAGCCAGATCGCGTTGTATTCAATGCACTTATAGCTGCTTGTGCTCGATCAGGAGCTGTGGATCGTGCTTTTGATGTTTTAGCAGAAATGGCTGCAGAATTACAACCTATCGAACCAGATCACATAACTATCGGTGCATTAATGAAGGCATGTGCAAAGGCTGGTCAGGTTGAACGCGCACGGGAAGTGTACCAGTGGTTAGACCAATATGATATAAAGGGAACTCCAGAGGTCTACACTATTGCCATCAATTCTTGCAGCCAAACTGGAGATTGGGAATTTGCATGTGATGTATACAGTGACATGATTGGGAAAGGGATTTTCCCGGATGAGATGTTTCTGAGTGCAATAATAGATTTTGCTGGACATTCTGGAAAACTAGATGCTGCCTTTGAAATCCTACAAGAAGCTCGTAACCGAGGAATGCATATTGGAAAAATCTCATACAGCTCTTTGATGGGAGCCTGTAGCAATGCTGGAAATTGGGAGAAAGCATTGGAGCTATATGAGGATCTTAATTCCCGTAAATTGGTGTATAGTGTTTCAACAGTGAATGCTTTGATCACGGCTCTGTGTGACGGGTATCAATTTCACAAGGCTATGGAAGTTTTGTTTGAAATGAGAGAATTGGGCCTATGCCCAAACAGCATCACATACTCAATACTTACAGTAGCAAGTGAGAAAAATGACGACTTGGAAGCAGCTCAAATGCTCCTATCTCAAGCCAAAATGGATGGTGTCTCCCCTAATCTTGTCATGTGTAGATGTATAACCGGGATGTGCTTGAGGAGATATGAGAAGGCTTGCAATGTTGGTGAACCTGGTTTATCTTTTGACTCAACACAACCACATGTTAATAATAAATGGACATCACTGGCCTTAACGGTGTATCGTGAGATGATTAGAGATGGTACAATGCCTACTAGTGAAATTCTGTCACAAATTTTTGGATGCCTCCAACTCCCTTATGATGCCTCTTTGAAGAATAATCTTATTGAGAGCCTGGGAGTAAATGCTCAGACTTCAAAGCACTCAAACCTCTGTTCATTGATTGATGGATTTGGTGAATATGATCCTCGTGCTTTTTCGCTACTTGAGGAAGCCGCATCTCTTGGAATTGTTCCATTTGCATCTTTTAAAGTGAATCCTATTGTTGCGGATTTGAAGGAGTTGCACAATTTTACTGCTGAGGTATACCTCTTAACTGTTTTGAAGGGTCTCAAGCATCGGCTTGCAGCAGGCACGAGGTTACCCAACTTAATCATCTTATTGCCCATAGAGAAAACAAAAGTTGCAACTTCGAAGGGGGAGAAACTTATTAACGTTTCAGGAAGGGTTAGCCAGGCAGTTACAGCGCTGCTGAGAAGGCTGAGAATACCATACCAGGGCAACGAATCATTTGGAAAGATCAGGGTTAATGGAGCAACCTTGAGAAGATGGCTTCAGCCAAAACTTGAATCTCCTTTCAGTGGAAAACCAGGTGACTTTACCTTATCACCATCACGACTCGGCAAAGGTATCAGCCTTCAACAGCGAAACATTCGAACTGGCAATCTGTCTTTGGATTAA 3654 0.4141 MGGVAILAYENAQELTIRLMLPTIWQSQTVSDIIPQIFIWPKTNESGPSSSQREKQIAPRQQRFGSASSSPTPTKLLALWFSHSSLPPLLPANIANPLSLSLSLSLSSMEVSLTSSHYTLSLTSRSSSSFSLPNLPSIRTQFLGSSHNLRPPGCVRSRNRKCKKIRLLHIHSPRFIFKASLTSPSVVVAITLVTLSAVSLFYHNYIKRKKNTKEILGHPKFALSQQGSNIGNQAIESQILCFQEFQGENLLKEIAILEDKSDRENHDFEGKEAQLTYCTSVKVQGEAVVTEKSKSPSDVLTSSINTASSSNSSKVVDESHLSMEFQSSSFEPLSFAAEMTELLVEETRDKAHSDSELPIIINKPEHTTSLDPLNNEFTIVKDHGKEKNELGAITSDVLVGESARQELYMFYQVNMSSTGSMSPLNGLKSQPSHSFFMKKKELQSTMVNNALKGPESLKEVSENVEGVEPRASYEEGGNCQQNGSRSLRKRKSSLSNRGNTDLNQKSSELIPQNSDPIREHVDKENRHSQHLIAYNSLLKDGRLHECVEVLKDMEMKGILDMTKVYHAKFFNNCKQQKAVREAFDYIKLVPNPKLSTFNMLMSVCSSSRDSEGAFQVLQLVQGAGLKSDCKLYTTLISTCAKSGKVDQMFEVFHNMVNSGIEPNVHTYGALIDGCARAGQVAKAFGAYGIMRSKKLKPDRVVFNALIAACARSGAVDRAFDVLAEMAAELQPIEPDHITIGALMKACAKAGQVERAREVYQWLDQYDIKGTPEVYTIAINSCSQTGDWEFACDVYSDMIGKGIFPDEMFLSAIIDFAGHSGKLDAAFEILQEARNRGMHIGKISYSSLMGACSNAGNWEKALELYEDLNSRKLVYSVSTVNALITALCDGYQFHKAMEVLFEMRELGLCPNSITYSILTVASEKNDDLEAAQMLLSQAKMDGVSPNLVMCRCITGMCLRRYEKACNVGEPGLSFDSTQPHVNNKWTSLALTVYREMIRDGTMPTSEILSQIFGCLQLPYDASLKNNLIESLGVNAQTSKHSNLCSLIDGFGEYDPRAFSLLEEAASLGIVPFASFKVNPIVADLKELHNFTAEVYLLTVLKGLKHRLAAGTRLPNLIILLPIEKTKVATSKGEKLINVSGRVSQAVTALLRRLRIPYQGNESFGKIRVNGATLRRWLQPKLESPFSGKPGDFTLSPSRLGKGISLQQRNIRTGNLSLD 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1795 1217 MobiDBLite consensus disorder prediction 44 70 - -
Mibi01g1795 1217 Gene3D Tetratricopeptide repeat domain 730 841 IPR011990 GO:0005515
Mibi01g1795 1217 MobiDBLite consensus disorder prediction 475 489 - -
Mibi01g1795 1217 MobiDBLite consensus disorder prediction 496 513 - -
Mibi01g1795 1217 FunFam Pentatricopeptide repeat-containing protein MRL1, chloroplastic isoform X1 728 819 - -
Mibi01g1795 1217 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 875 909 IPR002885 -
Mibi01g1795 1217 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 698 728 IPR002885 -
Mibi01g1795 1217 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 663 697 IPR002885 -
Mibi01g1795 1217 Pfam PPR repeat 535 558 IPR002885 -
Mibi01g1795 1217 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 770 804 IPR002885 -
Mibi01g1795 1217 FunFam Pentatricopeptide repeat-containing protein MRL1 chloroplastic 820 967 - -
Mibi01g1795 1217 SUPERFAMILY ARM repeat 744 876 IPR016024 -
Mibi01g1795 1217 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 840 874 IPR002885 -
Mibi01g1795 1217 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 118 1216 - -
Mibi01g1795 1217 MobiDBLite consensus disorder prediction 292 311 - -
Mibi01g1795 1217 MobiDBLite consensus disorder prediction 452 515 - -
Mibi01g1795 1217 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 628 662 IPR002885 -
Mibi01g1795 1217 TIGRFAM PPR: pentatricopeptide repeat domain 631 664 IPR002885 -
Mibi01g1795 1217 TIGRFAM PPR: pentatricopeptide repeat domain 878 910 IPR002885 -
Mibi01g1795 1217 TIGRFAM PPR: pentatricopeptide repeat domain 773 806 IPR002885 -
Mibi01g1795 1217 TIGRFAM PPR: pentatricopeptide repeat domain 665 698 IPR002885 -
Mibi01g1795 1217 TIGRFAM PPR: pentatricopeptide repeat domain 842 874 IPR002885 -
Mibi01g1795 1217 Gene3D Tetratricopeptide repeat domain 532 729 IPR011990 GO:0005515
Mibi01g1795 1217 FunFam Pentatricopeptide repeat-containing protein MRL1, chloroplastic 542 673 - -
Mibi01g1795 1217 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 735 769 IPR002885 -
Mibi01g1795 1217 Pfam Pentacotripeptide-repeat region of PRORP 743 884 IPR033443 -
Mibi01g1795 1217 Pfam Pentacotripeptide-repeat region of PRORP 595 734 IPR033443 -
Mibi01g1795 1217 Gene3D Tetratricopeptide repeat domain 842 968 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1795 Mibi-ChrMibi01 26257592 26269282 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1795 611 997 Glycosyltransferase AT1G05670 23.919 1.03e-29 125