Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1777 ATGGTGTTGAAGGAATCGTACCTGGCGATGTGTATACAGATGGCGGACGAGTTGATAAAGCTGCCGGAGGAGGCACAAACGTTCAGGGTAGAATGTTTGGAGCTGAAGGCCAAAGCGGAGAAAATGGCGGAATTACTGCGTTTAGCGGCGAGATCCTGCAACGAGCTGTACGAGAGGCCGACACGGCGGATCATCGACGAGACGGAGCAAGTCCTGGAGAAGGCACTGCAGCTTGTGGAAAAATGCTGTGGGAATGGCCTCATGAAAAGACTATTCACCATAATTCCGGCGACGGCGTTCAGGAAGACGGCGGTGCAGATGGATAATTCTATCAGCGACGTCCGGTGGCTCCTCCAAGTATCAAACCCGGGTGAAGATGATTGTATTGGTTTGCCCCCAATCGCCACCAACGAGCCCGTCTTGGGTATGATATGGGAACACATTGCTTCATTGCTCACCAGATCTTCCATGGAAAAACGTAACGATGCCGCCGCCTCCTTGATCTCTCTCGCTCTAGACAACGACCGGTACAATAAATTGATTGTAGAGGAGGGTGGTGTTCCACCATTGTTGAAATTGTTGAAGGAAGGGGATGTAACGGGACAGGAGAATGCGGCGAAAGCGATTGGGATACTTGCTAAAGACCCAGAAAGAGTGGAACAGATTGTGAATGCAGGGGTTTGCAATGTATTTGCCAAAATCCTGAAAGAAGGTGACATGAAGGTTCAATCTGAGGTCGCTCGGGCTATAGCTGAATTAGCATCTCATTACCCAAAATGTCAGGACCATTTTGCTCAGAACAATTGCATACGCTTGCTTGTAAGGCATCTCGCCTTTGAGACCATCCAGGAACACAGTAAGTACACCGTTAACACCAAGCAAAACATGTCCTCCATTCATTCCTTGATCATGGCCAGTAACGCCCAGAGTAACAACGACGACAACAACAATATGCATGAAGATGACTACATCAATCATAATGATAATAATGATAATGATCAGCATCATCACCTTGCTGTTCCTCGTCCTGTGGAGAGCCAATCATCGAGCCAAATGCACAATGTGATAACTAACACAATGGCGGCGAAGCAGCAGCAAGCACAGGGGAAGCATAATATTATGGCAGGAGCGGCGAGTTTGAAGGGGAGGGAGGCGGTGGATCCGGCGATAAAGGCGGCGATGAAGGCGATGGCGGCGATGGCATTGTGGAAACTATCAATTGGGAATGTGACAGTGTGTAGGAGCATAACAGAATCAAGGGCGCTCTTATGTTTTGCTGCTCTGTTGGAGAAAGGGCATGATGATAACGTTAAAGGGTACTCTGCTAATGCTTTAATGGAGATCACGGCTGTGGCAGAGGAAAACTCAGAGTTGAGGCGTTCTGCTTTCAAACCCAATACCCCTGCTGCAAAAGCCTTGCTGGATCAGTTTCTCAGGATCCTTGAGAATGGACAACCTTATCTTCTCCTACCTTGTATTAAATCAATAGGTCACTTGGCCAGGACTTTCAGGGCAACTGAAACTAGATTCATACCGCGATTGGTGGCTTTTCTTGAAGAAGAAGGAAAGGATTGGACTGAAATTAAATTTGAAGCCATAATTGCACTTACCAAGTTTGCTTCTACCGACAACTTTCTCCACGACACTCACTGCACATCCATTATAGACGCAGGAGGAGCCGAGCATTTGATTCAAATCATTTCCTTTTGTGAGCTGGGGTTCAAAATTGCTGCGCTGAAGCTTTTGAGTTATTTGGTAATGCATGTTCCCCAAAGTGAGGAGCTTGCCAAAAATAAAGACCTCCTCCCATTTCTGGAAAAATGTGGGATGCAGCATGAGCTTGTCCAAGAACCAGCCACCGTTGAGCTTCTTGCTGAAGCCAAGACAAGATTGGCCATGTATCAATTAAAAGAAACAAGAGTATTCGACGGATGTGATTCATTCTGA 1947 0.4705 MVLKESYLAMCIQMADELIKLPEEAQTFRVECLELKAKAEKMAELLRLAARSCNELYERPTRRIIDETEQVLEKALQLVEKCCGNGLMKRLFTIIPATAFRKTAVQMDNSISDVRWLLQVSNPGEDDCIGLPPIATNEPVLGMIWEHIASLLTRSSMEKRNDAAASLISLALDNDRYNKLIVEEGGVPPLLKLLKEGDVTGQENAAKAIGILAKDPERVEQIVNAGVCNVFAKILKEGDMKVQSEVARAIAELASHYPKCQDHFAQNNCIRLLVRHLAFETIQEHSKYTVNTKQNMSSIHSLIMASNAQSNNDDNNNMHEDDYINHNDNNDNDQHHHLAVPRPVESQSSSQMHNVITNTMAAKQQQAQGKHNIMAGAASLKGREAVDPAIKAAMKAMAAMALWKLSIGNVTVCRSITESRALLCFAALLEKGHDDNVKGYSANALMEITAVAEENSELRRSAFKPNTPAAKALLDQFLRILENGQPYLLLPCIKSIGHLARTFRATETRFIPRLVAFLEEEGKDWTEIKFEAIIALTKFASTDNFLHDTHCTSIIDAGGAEHLIQIISFCELGFKIAALKLLSYLVMHVPQSEELAKNKDLLPFLEKCGMQHELVQEPATVELLAEAKTRLAMYQLKETRVFDGCDSF 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1777 648 Gene3D - 5 120 IPR036537 GO:0007166
Mibi01g1777 648 SMART arm_5 173 214 IPR000225 GO:0005515
Mibi01g1777 648 SMART arm_5 409 450 IPR000225 GO:0005515
Mibi01g1777 648 SMART arm_5 215 255 IPR000225 GO:0005515
Mibi01g1777 648 SMART arm_5 547 587 IPR000225 GO:0005515
Mibi01g1777 648 MobiDBLite consensus disorder prediction 315 337 - -
Mibi01g1777 648 Pfam Armadillo/beta-catenin-like repeat 180 213 IPR000225 GO:0005515
Mibi01g1777 648 FunFam Armadillo repeat only 2 146 317 - -
Mibi01g1777 648 SUPERFAMILY ARM repeat 145 608 IPR016024 -
Mibi01g1777 648 Gene3D - 145 324 IPR011989 -
Mibi01g1777 648 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 185 227 IPR000225 GO:0005515
Mibi01g1777 648 MobiDBLite consensus disorder prediction 308 337 - -
Mibi01g1777 648 Gene3D - 364 627 IPR011989 -
Mibi01g1777 648 PANTHER ARMADILLO REPEAT ONLY 4 5 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1777 Mibi-ChrMibi01 26033529 26035691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1777 148 274 U-box Gene Family AT2G28830 32.031 2.29e-08 55.5